Return to main results Retrieve Phyre Job Id

Job DescriptionP77218
Confidence17.66%DateThu Jan 5 12:26:31 GMT 2012
Rank32Aligned Residues93
% Identity9%Templated1pdoa_
SCOP infoPTS system fructose IIA component-like PTS system fructose IIA component-like EIIA-man component-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  RVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGY
Query Conservation 





 
  

           
  
         


    
 
     
  
   
 
 
 




 
 
 



  
Alig confidence 












.......


















.







































Template Conservation   


 


  
 
.......
  
   
 
    
  
 .             
   
        






 



 
Template Sequence  AIVIGTHGWAAEQ. . . . . . . LLKTAEMLLGEQENVGWID. FVPGENAETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFN
Template Known Secondary structure 
SBT.......


SS
.B
TT

TTS

TT
SSTTS
Template Predicted Secondary structure 



.......





.
















Template SS confidence 















































































   4.....10...... ...20.........30..... ....40.........50.........60.........70.....
 
   278.280.........290.........
Predicted Secondary structure 












Query SS confidence 





















Query Sequence  KIAQRLGGYRAVGPLIQGLAAP
Query Conservation 
           
 

 
   
Alig confidence 












.







Template Conservation   
           .







Template Sequence  AASRIVVDKEHYE. VIAGVNIP
Template Known Secondary structure  TT
TT.S

Template Predicted Secondary structure 


.


Template SS confidence 





















   76...80........ .90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions