Job Description P77218 Confidence 10.30% Date Thu Jan 5 12:26:31 GMT 2012 Rank 59 Aligned Residues 86 % Identity 8% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	M	L	S	F	S	S	N	G	S	A	R	H	P	C	V	A	N	V	Q	Q	A	T	E	I	V	R	E	R	A	P	K	L	V	V	D	G	E	L	Q	F	D	A	A	F	V	P	E	V	A	A	Q	K	A	P	A	S	P	L	Q	G	K	A	N	V	M	V	F	P	S	L	E	A	G	N	I	G	Y
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		N	V	G	V	F	.	.	.	.	V	L	X	H	G	D	S	T	A	S	S	X	L	K	T	A	Q	E	L	L	G	T	S	I	G	T	A	X	N	X	P	L	T	X	E	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D	X	G	S	L	N	S	F	G
Template Known Secondary structure							.	.	.	.					S	S	S														T											T	T	S															T	S	T	G	G	G	T	T								S	G	G	G	G	G
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		544	.	.	.	.					.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	Q	R	L	G	G	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	X	L	F	E	E	T	G	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		620	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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