Return to main results Retrieve Phyre Job Id

Job DescriptionP77218
Confidence46.40%DateThu Jan 5 12:26:31 GMT 2012
Rank22Aligned Residues83
% Identity13%Templatec2vy9A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:anti-sigma-factor antagonist; PDBTitle: molecular architecture of the stressosome, a signal2 integration and transduction hub
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60.........70...
Predicted Secondary structure 






........















Query SS confidence 






















. . . . . . . .
















































Query Sequence  IIERCRELALRAPARVVFPDALD. . . . . . . . QRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGN
Query Conservation        
 
    



  

 
........  

 

  
  

 
  



    
       
      


     
Alig confidence 






















........











































.....
Template Conservation 
 
 
   
       





 
  




   
          
  
 
 

 
 
   
   
         .....
Template Sequence  FKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVLTGIKPAVAITLTEXGLDLRGXATA. . . . .
Template Known Secondary structure  TTS

S
TT
SS

TT




TT

STTS.....
Template Predicted Secondary structure 























.....
Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100....
 
   74.....80.........90
Predicted Secondary structure 


Query SS confidence 
















Query Sequence  LAMREEFAHRWLARAGE
Query Conservation               
   
Alig confidence  .















Template Conservation  . 

  

  
    
 
Template Sequence  . LNLQKGLDKLKNLARX
Template Known Secondary structure  .SSTT
Template Predicted Secondary structure  .





Template SS confidence 
















   105....110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions