Job Description P77218 Confidence 8.17% Date Thu Jan 5 12:26:31 GMT 2012 Rank 74 Aligned Residues 233 % Identity 15% Template c2e0cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:409aa long hypothetical nadp-dependent isocitrate PDBTitle: crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii2 strain7 at 2.0 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	P	A	R	V	V	F	P	D	A	L	D	.	.	Q	R	V	L	K	A	A	Q	Y	L	H	Q	Q	G	L	A	T	P	I	L	V	A	N	P	F	E	L	R	Q	F	A	L	S	H	G	V	A	M	D	G	L	Q	V	I	D	P	H	G	N	L	A	M	R	E	E	F	A	H	R	W	L	A	R	A	G	E
Query Conservation														.	.
Alig confidence														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	P	V	I	L	Y	I	E	G	D	G	I	G	P	E	I	T	N	A	A	I	K	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	A	V	E	R	A	Y	G	S	S	R	E	I	K	W	L	E	V	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	E	K	A	E	K	L	V	N	D
Template Known Secondary structure		S	S	B								S	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S									.	.	.	.	.	.	.	.	.	.	.			T								S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.	.	70	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		K	T	P	P	D	A	L	E	K	L	T	D	P	L	M	F	A	A	A	M	V	S	A	G	K	A	D	V	C	I	A	G	N	L	S	S	T	A	N	V	L	R	A	G	L	R	I	I	G	L	Q	P	G	C	K	T	L	S	S	I	F	L	M	L	P	Q	Y	S	G	P	A	L	G	F	A	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	P	K	E	T	Q	E	M	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	V	V	L	K	G	P	L	E	S	V	N	V	A	I	R	L	M	L	D	L	Y	A	N	I	R	P	V	K	Y	I	E	G	L	E	S	P	L	K	H	P	E	K	V	D	M	I	I	F	R	E	N	T	D
Template Known Secondary structure		S	S											.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T												T	T				S	S	S			T	T										S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90														.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
																																		166	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	S	V	V	P	Q	P	T	A	A	Q	L	.	A	D	I	A	L	A	S	A	E	T	W	R	A	I	T	G	E	E	P	R	V	A	M	L	S	F	S	S	N	G	S	.	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																.	.								.	.	.					.
Template Conservation																																																															.	.								.	.	.
Template Sequence		D	L	Y	R	G	I	E	Y	P	F	N	S	E	E	A	K	K	I	R	D	F	L	R	K	E	L	K	V	E	I	E	D	D	T	G	I	G	I	K	V	M	S	K	Y	K	T	Q	R	I	T	R	L	A	I	Q	Y	A	I	E	H	K	.	.	R	K	K	V	T	I	M	.	.	.	H	K	G	N	V	M	K
Template Known Secondary structure		G	G	G	G						T	T	S														S						S	S																											T	T	.	.								.	.	.			T	T	T	S	T
Template Predicted Secondary structure																																																															.	.								.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.				.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	C	V	A	N	V	Q	Q	A	T	E	I	V	R	E	R	A	P	K	L	V	V	D	G	E	L	.	.	.	.	.	.	.	.	.	.	.	Q	F	D	A	A	F	V	P	E	V	A	A	Q	K	A	P	A	S	P	L	Q	G	K	A	N	V	M	V	F	P	S	L	E	A	G	N	I	G	Y	K	I	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																				.	.	.												.
Template Conservation																																																											.	.	.												.
Template Sequence		Y	T	E	G	A	F	R	E	W	A	Y	E	V	A	L	K	E	Y	R	D	F	I	V	T	E	E	E	I	N	Q	G	K	P	D	Q	G	K	I	I	L	N	D	R	I	A	D	N	M	F	Q	Q	I	I	I	R	P	E	.	.	.	E	Y	D	I	I	L	A	P	N	V	N	.	G	D	Y	I	S	D	A	A
Template Known Secondary structure		T	T																S	T	T	T								T	T	T				T	T	S																			G	G	.	.	.	G		S									.
Template Predicted Secondary structure																																																											.	.	.												.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	G	G	Y	R	A	V	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	I	G	N	I	G	M	L	G
Template Known Secondary structure				T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions