Return to main results Retrieve Phyre Job Id

Job DescriptionP52044
Confidence92.60%DateThu Jan 5 12:04:58 GMT 2012
Rank180Aligned Residues55
% Identity11%Templated1y0ua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.......
Predicted Secondary structure 












Query SS confidence 

























































Query Sequence  RNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQEL
Query Conservation    
  
   

 
 

  
 


 


  
  

  

  

 
      

  
  
Alig confidence 




































...

















Template Conservation 



 
 
 

  

  

 


 

 



 

 

...     
 
  


 
   
Template Sequence  KILRXLDKGRSEEEIXQTLSLSKKQLDYHLKVLEAGF. . . CIERVGERWVVTDAGKIV
Template Known Secondary structure  TT

T

TT...STT
TTT


Template Predicted Secondary structure 








...











Template SS confidence 

























































   33......40.........50.........60......... 70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions