Job Description P52044 Confidence 24.24% Date Thu Jan 5 12:04:58 GMT 2012 Rank 407 Aligned Residues 181 % Identity 12% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		L	I	S	L	G	D	K	Y	E	G	V	T	A	Q	P	V	E	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	V	I	D	N	L	F	D	R	Q	L	D	F	I	I	.	S	P	Q	H	V	S	A	R	V	Q	E	L	E	N	L	T	I	S	E	L	P	P	L	R	L	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		L	L	I	K	L	A	R	T	M	N	F	T	Y	E	V	H	L	V	A	D	G	K	F	G	T	Q	E	R	V	N	N	S	N	K	K	E	W	N	G	M	M	G	E	L	L	S	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	Q	Y	I	E	F	S	K	P	F	K	Y	Q	G	L	T	I	L
Template Known Secondary structure											T									T	T										T	T	S	S														T	S		S				S	S		B							T	T					S		S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250
Predicted Secondary structure																																																		.																										.
Query SS confidence																																																		.																										.
Query Sequence		F	L	V	S	R	R	Y	E	E	R	Q	E	Q	E	L	L	Q	E	L	P	W	L	Q	M	R	F	Q	N	R	A	N	F	E	A	M	I	D	A	N	M	R	P	C	G	I	N	P	T	.	I	I	Y	R	P	Y	S	F	M	A	K	I	S	A	V	E	R	G	H	F	L	T	V	I	P	.	H	F	A	W	R
Query Conservation																																																		.																										.
Alig confidence																																																		.																										.
Template Conservation
Template Sequence		V	K	K	G	T	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	K	F	I	Y	A	T	V	K	Q	S	S	V	D	I	Y	F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	E	K	H	N	Y	E	S	A	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W	D	S	A	V	L	E
Template Known Secondary structure				T	T					S	T	T						S		B	T	T	B					B	T	T	S								T		G	G	G								T	T	T		B	S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	P	A	T	L	K	Y	F	D	A	P	H	R	P	M	Y	M	Q	E	Y	L	Y	S	I	R	N	H	R	Y	T	A	T	M	L	Q	H	I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	A	S	Q	K	C	D	L	V	T	T	G	E	L	F	F	R	S	G	F	G	I	G	M	R	K	D	S	P	W	K	Q	N	V	S	L	S	I	L	K
Template Known Secondary structure								T	T					S	S		S											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions