Job Description P52044 Confidence 97.46% Date Thu Jan 5 12:04:58 GMT 2012 Rank 53 Aligned Residues 74 % Identity 19% Template d1lj9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																		.	.																																				.	.	.	.	.	.	.
Query SS confidence																		.	.																																				.	.	.	.	.	.	.
Query Sequence		F	I	S	K	K	M	R	N	F	I	L	L	A	Q	T	N	.	.	N	I	A	R	A	A	E	K	I	H	M	T	A	S	P	F	G	K	S	I	A	A	L	E	E	Q	I	G	Y	T	L	F	T	R	K	.	.	.	.	.	.	.	D	N	N	I	S	L	N	K	A	G	Q	E	L	Y	Q	K	L	F	P	V
Query Conservation																		.	.																																				.	.	.	.	.	.	.
Alig confidence																		.	.																										.	.	.								.	.	.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		L	T	R	G	Q	Y	L	Y	L	V	R	V	C	E	N	P	G	I	I	Q	E	K	I	A	E	L	I	K	V	D	R	T	T	A	A	R	A	I	K	R	L	E	E	.	.	.	Q	G	F	I	Y	R	Q	E	D	A	S	N	K	K	I	K	R	I	Y	A	T	E	K	G	K	N	V	Y	P	I	I	V	R	E
Template Known Secondary structure			T	T	T											S	T	T											T																.	.	.	T	T	S							S	S		T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		75	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	H	S	N	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions