Job Description P52044 Confidence 99.54% Date Thu Jan 5 12:04:58 GMT 2012 Rank 27 Aligned Residues 196 % Identity 12% Template d1i6aa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	R	E	I	V	I	G	I	D	N	T	Y	P	T	I	I	F	D	Q	L	I	S	L	G	D	K	Y	E	G	V	T	A	Q	P	V	E	F	S	E	N	G	V	I	D	N	L	F	D	R	Q	L	D	F	I	I	S	P	Q	H	V	S	A	R	V	Q	E	L	E	N	L	T	I	S	E	L	P	P	L	R
Query Conservation
Alig confidence																																																																													.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		S	G	P	L	H	I	G	L	I	P	T	V	G	P	Y	L	L	P	H	I	I	P	M	L	H	Q	T	F	P	K	L	E	M	Y	L	H	E	A	Q	T	H	Q	L	L	A	Q	L	D	S	G	K	L	D	A	V	I	L	A	L	V	K	E	S	E	A	F	I	E	V	P	L	F	D	E	P	.	.	.	M	L
Template Known Secondary structure											T	T	T																	T	T																				T	S		S								G	G	G	T	T	S										.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		L	G	F	L	V	S	R	R	Y	E	E	R	Q	E	Q	E	L	L	Q	E	L	P	W	L	Q	M	R	F	Q	N	R	A	N	F	E	A	M	I	D	A	N	M	R	P	C	G	I	N	P	T	I	I	Y	R	P	Y	S	F	M	A	K	I	S	A	V	E	R	G	H	F	L	T	V	I	P	.	H	F	A	W
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		L	A	I	Y	E	D	H	P	W	A	N	R	E	A	V	P	M	A	D	L	A	G	E	K	L	L	M	L	E	D	G	H	C	L	R	D	Q	A	M	G	F	C	F	E	A	G	A	D	E	D	T	H	F	R	A	T	S	L	E	T	L	R	N	M	V	A	A	G	S	G	I	T	L	L	P	A	L	A	V	P
Template Known Secondary structure						T	T	S	G	G	G	G		S				G	G	G	G	T	T	S						T	T	T	T		S	S		T	T	S	S		S	S		T	T	S					T	T	T	T	S											T	T	S		B					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	N	P	A	T	L	K	Y	F	D	A	P	H	R	P	M	Y	M	Q	E	Y	L	Y	S	I	R	N	H	R	Y	T	A	T	M	L	Q	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	R	K	R	D	G	V	V	Y	L	P	A	I	K	P	E	P	R	R	T	I	G	L	V	Y	R	P	G	S	P	L	R	S	R	Y	E	Q	L	A
Template Known Secondary structure		S	S	S			T	T								S	S												T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions