Job Description P52044 Confidence 97.32% Date Thu Jan 5 12:04:58 GMT 2012 Rank 69 Aligned Residues 76 % Identity 16% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																					.	.	.	.	.
Query SS confidence																	.	.	.	.																																					.	.	.	.	.
Query Sequence		F	I	S	K	K	M	R	N	F	I	L	L	A	Q	T	.	.	.	.	N	N	I	A	R	A	A	E	K	I	H	M	T	A	S	P	F	G	K	S	I	A	A	L	E	E	Q	I	G	Y	T	L	F	T	R	K	.	.	.	.	.	D	N	N	I	S	L	N	K	A	G	Q	E	L	Y	Q	K	L	F	P	V
Query Conservation																	.	.	.	.																																					.	.	.	.	.
Alig confidence																	.	.	.	.																											.										.	.	.	.	.
Template Conservation																																															.
Template Sequence		L	T	S	R	Q	Y	X	T	I	L	S	I	L	H	L	P	E	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	.	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	G	K	K	V	X	V	T	C	S	R	T
Template Known Secondary structure		S													T	S		G	G	G											T	S															.	T	T	S							S	S		T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		75	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	F	X	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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