 |
| Job Description | P52044 | | Confidence | 34.99% | Date | Thu Jan 5 12:04:58 GMT 2012 |
| Rank | 356 | Aligned Residues | 59 |
| % Identity | 15% | Template | c3lwfD_ |
| PDB info |
PDB header:transcription regulator | Chain: D: PDB Molecule:putative transcriptional regulator; |
PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
|
| Resolution | 2.06 Å |
|
| | |
8 | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | |
| . | . | . | . | . |
| | | | | | | | |
|
|
| | | | | | | | | | | | | | | |
|
|  | | | |  |
|
|
|
| . | | | |
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
K | M | R | N | F | I | L | L | A | Q | T | N | . |
. |
. |
. |
. |
N | I | A | R | A | A | E | K | I | H | M | T | A | S | P | F | G | K | S | I | A | A | L | E | E | Q | I | G | Y | T | L | F | T | R | K | D | N | N | . |
I | S | L | N | K | A | G | Q | E | L |
| Query Conservation | |
|
| | |
| | |
| | | |
| . | . | . | . | . |
| |
| |
|
| | |
| |
|
|
| |
|
|
| | |
| | |
|
| | |
|
| | |
|
| |
| | | | | . | | |
|
| | |
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | |
| | |
|
| | | | | | | | |
| | | |
|
| | | | |
| | | | |
| |
|
|
| | |
| | | . |
|
|
|
| |
| |
|
| | |
|
|
| |
|
|
| | | | |
|
| Template Sequence | |
G | L | T | I | T | L | E | L | A | K | R | I | G | D | G | P | I | S | L | R | S | I | A | Q | D | K | N | L | S | E | H | Y | L | E | Q | L | I | G | P | L | R | N | . |
A | G | I | V | K | S | I | R | G | A | H | G | G | Y | V | L | N | G | D | P | E | K | I |
| Template Known Secondary structure | |
| | | | | | | | | | T | T | T | S |
|
| B |
| | | | | | | | | T |
|
| | | | | | | | | | | | | | . | T | T | S | | | | |
| S | T | T |
| | | | |
| S |
| T | T | T |
|
| Template Predicted Secondary structure | |
| | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | | | | | | . |
|
|
| | | | | |
|
|
|
|
| | | |
|
|
| | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
