Return to main results Retrieve Phyre Job Id

Job DescriptionP52044
Confidence25.61%DateThu Jan 5 12:04:58 GMT 2012
Rank397Aligned Residues60
% Identity5%Templatec3ihuA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of dna binding protein (yp_298823.1) from ralstonia2 eutropha jmp134 at 1.92 a resolution
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80......
Predicted Secondary structure 










Query SS confidence 





























































Query Sequence  AEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIH
Query Conservation 
  
 


 


  
  

  

  

 
      

  
  
       
           
Alig confidence 




















..






































Template Conservation 
   



  




  
   ..


    
 
  
                          
Template Sequence  VAHFGVGRNSVREALQRLAAE. . GIVDLQRHRGAVIRRLSLQETLDVLDVAERXTGLLARAA
Template Known Secondary structure  T

T..TS
STT




Template Predicted Secondary structure 



..







Template SS confidence 





























































   45....50.........60..... ....70.........80.........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions