Job Description P52044 Confidence 99.61% Date Thu Jan 5 12:04:58 GMT 2012 Rank 21 Aligned Residues 196 % Identity 15% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	R	E	I	V	I	G	I	D	N	T	Y	P	T	I	I	F	D	Q	L	I	S	L	G	D	K	Y	E	G	V	T	A	Q	P	V	E	F	S	E	N	G	V	I	D	N	L	F	D	R	Q	L	D	F	I	I	S	P	Q	H	V	S	A	R	V	Q	E	L	E	N	L	T	I	S	E	L	P	P	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	W	Q	T	V	P	L	X	T	R	E	P	X	V	V	L
Template Known Secondary structure											G	G	G	T	T	T	T													T	T																				T	S		S						S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		L	G	F	L	V	S	R	R	Y	E	E	R	Q	E	Q	E	L	L	Q	E	L	P	W	L	Q	M	R	F	Q	N	R	A	N	F	E	A	M	I	D	A	N	M	R	P	C	G	I	N	P	T	I	I	Y	R	P	Y	S	F	M	A	K	I	S	A	V	E	R	G	H	F	L	T	V	I	P	.	H	F	A	W
Query Conservation																																																																													.
Alig confidence																													.	.	.																																														.
Template Conservation																													.	.	.
Template Sequence		G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	.	.	.	A	P	P	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	R	V
Template Known Secondary structure			T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S							.	.	.		T	T												T	T										S												T	S		B				S				S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		R	L	V	N	P	A	T	L	K	Y	F	D	A	.	.	P	H	R	P	M	Y	M	Q	E	Y	L	Y	S	I	R	N	H	R	Y	T	A	T	M	L	Q	H	I
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		D	V	T	Y	E	G	L	P	V	V	V	K	P	I	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S	R	V	A	R	A	F	I
Template Known Secondary structure			B		T	T	S		B						B		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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