Job Description P52044 Confidence 21.99% Date Thu Jan 5 12:04:58 GMT 2012 Rank 419 Aligned Residues 65 % Identity 15% Template c2jmlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna binding domain/transcriptional regulator; PDBTitle: solution structure of the n-terminal domain of cara repressor Resolution UNK

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.						.
Query SS confidence																																					.						.
Query Sequence		N	I	A	R	A	A	E	K	I	H	M	T	A	S	P	F	G	K	S	I	A	A	L	E	E	Q	I	G	Y	T	L	F	T	R	K	.	D	N	N	I	S	.	L	N	K	A	G	Q	E	L	Y	Q	K	L	F	P	V	Y	Q	R	L	S	A	I	D	N	E	I	H	N	S
Query Conservation																																					.						.
Alig confidence																					.	.	.	.													.						.
Template Conservation																					.	.	.	.
Template Sequence		R	I	R	T	I	A	R	M	T	G	I	R	E	A	T	L	R	A	W	.	.	.	.	E	R	R	Y	G	F	P	R	P	L	R	S	E	G	N	N	Y	R	V	Y	S	R	E	E	V	E	A	V	R	R	V	A	R	L	I	Q	E	E	G	L	S	V	S	E	A	I	A	Q
Template Known Secondary structure									T	T	S	T	T								.	.	.	.				T			S			B	S	S	S		S	S	S																					T	S	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions