Job Description P52044 Confidence 29.99% Date Thu Jan 5 12:04:58 GMT 2012 Rank 372 Aligned Residues 54 % Identity 11% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		T	A	S	P	F	G	K	S	I	A	A	L	E	E	Q	I	G	Y	T	L	F	T	R	K	D	N	N	I	S	L	N	K	A	G	Q	E	L	Y	Q	K	L	F	.	.	.	.	.	.	.	.	.	P	V	Y	Q	R	L	S	A	I	D	N	E	I	H	N
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		R	P	S	T	Y	A	S	T	I	K	L	L	.	.	.	L	N	R	G	Y	I	K	K	I	R	G	Y	L	Y	P	T	I	V	G	S	V	V	M	D	Y	L	E	K	K	Y	S	D	V	V	S	V	S	F	T	A	E	M	E	K	D	L	D	E	V	E	Q
Template Known Secondary structure			T	T	T									.	.	.			T	T	S					T	T					B														S	T	T	T	T	S																T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.				.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions