Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT3
Confidence70.03%DateThu Jan 5 12:38:08 GMT 2012
Rank349Aligned Residues33
% Identity9%Templated1bl0a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3..... .10.........20.........30.....
Predicted Secondary structure  .








Query SS confidence 





.


























Query Sequence  YVFIEK. HQAEFSIKAMCRVLRVARSGWYTWCQR
Query Conservation     
  .     

  
    



 
 
 
  
Alig confidence 





.


























Template Conservation    

       


  

     
   
 
 

 
Template Sequence  LDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKK
Template Known Secondary structure  TTTTS



SSS
Template Predicted Secondary structure 








Template SS confidence 

































   17..20.........30.........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions