Job Description Q9JMT3 Confidence 99.47% Date Thu Jan 5 12:38:08 GMT 2012 Rank 7 Aligned Residues 145 % Identity 19% Template c3nf9A_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:integrase; PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design Resolution 1.95 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	A	G	D	I	T	Y	L	R	T	D	E	G	W	L	Y	L	A	V	V	I	D	L	W	S	R	A	V	I	G	W	S	M	S	P	R	M	T	A	Q	L	A	C	D	A	L	Q	M	A	L	W	R	R	K	R	P	W	N	V	I	V	H	T	D	R	G	G	Q	Y	C	S	A	D	Y	Q	A	Q	L	K
Query Conservation
Alig confidence											.	.	.	.																																										.	.	.	.
Template Conservation											.	.	.	.																																										.	.	.	.
Template Sequence		I	W	Q	L	D	C	T	H	L	.	.	.	.	E	G	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	P	.	.	.	.	V	K	T	V	H	T	D	N	G	S	N	F	T	S	T	T	V	K	A	A	C	W
Template Known Secondary structure											.	.	.	.	T	T									T	T	T	T								S	S																	S		.	.	.	.							S	S
Template Predicted Secondary structure											.	.	.	.																																										.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	N	L	R	G	S	M	S	A	K	G	C	C	Y	D	N	A	C	V	E	S	F	F	H	S	L	K	V	E	C	I	H	G	E	H	F	I	S	R	E	I	M	R	A	T	V	F	N	Y	I	E	C	D	Y	N	R	W	R	R	H	S	W	C	G	G	L	S	P	E	Q	F	E	N	Q	N	L
Query Conservation
Alig confidence																																									.	.											.														.
Template Conservation																																									.	.											.														.
Template Sequence		W	A	G	I	K	Q	E	D	G	I	P	Y	N	P	Q	S	Q	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	.	.	H	L	K	T	A	V	Q	M	A	V	.	F	I	H	N	H	K	R	K	G	Y	S	A	G	.	E	R	I	V	D	I	I	A	T	D	I
Template Known Secondary structure				T									S	S	T																					G	G	G		S	.	.	S										.							B				B			.
Template Predicted Secondary structure																																									.	.											.														.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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