Job Description Q9JMT3 Confidence 66.46% Date Thu Jan 5 12:38:08 GMT 2012 Rank 366 Aligned Residues 83 % Identity 10% Template c3lsgD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:two-component response regulator yesn; PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	F	I	E	K	.	.	H	Q	A	E	F	S	I	K	A	M	C	R	V	L	R	V	A	R	S	G	W	Y	T	W	C	Q	R	R	T	R	I	S	T	R	Q	Q	F	R	Q	H	C	D	S	V	V	L	A	A	F	T	R	S	K	Q	R	Y	C	A	P	R	L	T	D	E	L	R	A	Q	G	Y	P	F	N
Query Conservation							.	.
Alig confidence							.	.																																																								.	.	.	.	.											.
Template Conservation																																																																.	.	.	.	.											.
Template Sequence		N	I	I	E	E	S	Y	T	D	S	Q	F	T	L	S	V	L	S	E	K	L	D	L	S	S	G	Y	L	S	I	X	F	K	K	N	F	G	I	P	F	Q	D	Y	L	L	Q	K	R	X	E	K	A	K	L	L	L	L	T	T	E	L	K	.	.	.	.	.	N	Y	E	I	A	E	Q	V	G	F	.	E	D
Template Known Secondary structure						T	T	T	T	S	T	T											T															S	S																									.	.	.	.	.								T	T		.	S
Template Predicted Secondary structure																																																																.	.	.	.	.											.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230		.	.
		82	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	V	A	A	S	L	R	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Y	F	I	T	K	F	K	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions