 |
Job Description | Q9JMT3 | Confidence | 89.47% | Date | Thu Jan 5 12:38:08 GMT 2012 |
Rank | 64 | Aligned Residues | 44 |
% Identity | 16% | Template | c3dcfB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr |
PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution
|
Resolution | 2.50 Å |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | F | S | I | K | A | M | C | R | V | L | R | V | A | R | S | G | W | Y | T | W | C | Q | R | R | T | R | I | S | T | R | Q | Q | F | R | Q | H | C | D | S | V | V | L | A | A | F | T | R |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | A | T | S | L | D | D | I | A | D | R | I | G | F | T | K | P | A | I | Y | Y | Y | . |
. |
. |
. |
. |
F | K | S | K | E | D | V | L | F | A | I | V | N | S | I | V | D | E | A | L | E | R |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | . | . | . | . | . |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|