Job Description Q9JMT3 Confidence 98.56% Date Thu Jan 5 12:38:08 GMT 2012 Rank 18 Aligned Residues 87 % Identity 15% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		K	Y	V	F	I	E	K	H	Q	A	E	F	S	I	K	A	M	C	R	V	L	R	V	A	R	S	G	W	Y	T	W	C	Q	R	.	.	.	.	.	.	R	T	R	I	S	T	R	Q	Q	F	R	Q	H	C	D	S	V	V	L	A	A	F	T	R	S	K	Q	R	Y	C	A	P	R	L	T	D	E	L	R	A
Query Conservation																																				.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	.	.	.	.	.	R	D	I	R	N	E
Template Known Secondary structure											T	T											T												S	G	G	G	T	T										S	S																				.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	Y	P	F	N	V	K	T	V	A	A	S	L	R	C	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S	G
Template Known Secondary structure		T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions