Return to main results Retrieve Phyre Job Id

Job DescriptionP37773
Confidence100.00%DateThu Jan 5 11:57:40 GMT 2012
Rank17Aligned Residues211
% Identity29%Templated1p3da3
SCOP infoRibokinase-like MurD-like peptide ligases, catalytic domain MurCDEF
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  GPQWLHDFVLRDRWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSAHLGESDFFVIEADEYDCAFFDKR
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Template Sequence  RAQXLAEI. XRFRHGIAVAGTHGKTTTTAXISXIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLH. .
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.TSSSS
TT


TTTT

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TTSGGGG..
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   107..110.... .....120.........130.........140.........150.........160.........170.........180...
 
   171........180.........190.... .....200.........210.........220.........230...... ...240........
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Query Sequence  SKFVHYCPRTLILNNLEFDHADIF. DDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWS. EQELVGEQGHWQ
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Template Sequence  . . . . . LQPXVSVVTNXEPDHXDTYEGDFEKXKATYVKFLHNLPFYGLAVXCADDPVLXELVPKVGRQVITYGFSEQADYR
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SGGGGTT
TTS
TT
TT

SSSTT
S
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   184.....190.........200.........210.........220.........230.........240.........250........
 
   249250...... ...260.........270.........280.........290.........300.........
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Query Sequence  AKKLTTDA. . SEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPADAANALGSFI
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Template Sequence  IEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQ
Template Known Secondary structure  TT
TT

SS
STT

T

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   259260.........270.........280.........290.........300.........310.........320.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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