Return to main results Retrieve Phyre Job Id

Job DescriptionP37773
Confidence99.85%DateThu Jan 5 11:57:40 GMT 2012
Rank24Aligned Residues138
% Identity25%Templated1p3da2
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320 .........330.........340.........350.........360.........370.........380.....
Predicted Secondary structure 





....




















Query SS confidence 










. . . .
































































Query Sequence  NARRRLELRGE. . . . ANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVF
Query Conservation      
 
 
  ....  
   


 
 

 
  
 
  
         



                    
   
 

Alig confidence 










....









































..




















Template Conservation 

 



 
           

 
 



    
    
       
 
 
      ..
                  
 
Template Sequence  GAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVXIFQPHRY. . SRTRDLFDDFVQVLSQVDALI
Template Known Secondary structure 

TTSSTT


S
SS


B
..TTTSS
Template Predicted Secondary structure 




























..



Template SS confidence 















































































   322.......330.........340.........350.........360.........370........ .380.........390.........
 
   386...390... ......400.........410.........420.........430.........440.........
Predicted Secondary structure 




..........














Query SS confidence 







. . . . . . . . . .























































Query Sequence  LLQPAHIP. . . . . . . . . . WQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGL
Query Conservation 
       ..........                     


      
  

 


 
 

       
   
Alig confidence 







..........























































Template Conservation                                          
   
   
  

 


 
 

       
 
  
Template Sequence  XLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW
Template Known Secondary structure 

B
TT



TT
STS


S
GGG

TT

SST
Template Predicted Secondary structure 




























Template SS confidence 









































































   400.........410.........420.........430.........440.........450.........460.........470...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions