Job Description P37773 Confidence 96.17% Date Thu Jan 5 11:57:40 GMT 2012 Rank 234 Aligned Residues 90 % Identity 11% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																										.																																																		.	.	.	.	.	.
Query SS confidence																										.																																																		.	.	.	.	.	.
Query Sequence		R	I	H	I	L	G	I	C	G	T	F	M	G	G	L	A	M	L	A	R	Q	L	G	H	.	E	V	T	G	S	D	A	N	V	Y	P	P	M	S	T	L	L	E	K	Q	G	I	E	L	I	Q	G	Y	D	A	S	Q	L	E	P	Q	P	D	L	V	I	I	G	N	A	M	T	R	G	.	.	.	.	.	.
Query Conservation																										.																																																		.	.	.	.	.	.
Alig confidence																.										.							.										.	.																																.	.	.	.	.	.
Template Conservation																.																	.										.	.
Template Sequence		P	V	V	V	V	G	A	G	G	A	A	R	A	V	.	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	.	R	T	I	E	R	A	K	A	L	.	.	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V
Template Known Secondary structure		S							S							.							T	T									.	S							T		.	.		S	S						G	G	G							T		S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure																.																	.										.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
																				75	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	C	V	E	A	V	L	E	K	N	I	P	.	Y	M	S	G	P	Q	W	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		S	D	D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K	G	N	L	M	F
Template Known Secondary structure							T	T		S						S	S	S												T		S					T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions