Job Description P37773 Confidence 100.00% Date Thu Jan 5 11:57:40 GMT 2012 Rank 11 Aligned Residues 376 % Identity 24% Template c2wtzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate- PDBTitle: mure ligase of mycobacterium tuberculosis Resolution 3.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		L	A	M	L	A	R	Q	L	G	H	E	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	S	D	A	N	V	Y	P	P	M	S	T	L	L	E	K	Q	G	I	E	L	I	Q	G	Y	D	.	.	A	S	Q	L	E	P	Q	P	D	L	V	I	I	G	N	A	M	T	R	G	N	P	C	V	E	A	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																						.				.	.																	.	.	.	.	.
Template Conservation																																																	.																						.	.	.	.	.
Template Sequence		L	A	A	L	A	D	Q	V	G	A	A	L	A	E	G	V	T	E	D	R	T	V	T	G	V	T	L	R	A	Q	D	V	S	P	G	D	L	F	A	A	L	T	G	S	T	T	H	.	G	A	R	H	V	G	D	A	I	A	R	G	A	V	A	V	L	T	D	P	A	.	.	.	.	.	G	V	A	E	I	A
Template Known Secondary structure									T	T				S				T	T	T								S		G	G	G			T	T							B		S	S		B	.	G	G	G	G							T	T										.	.	.	.	.
Template Predicted Secondary structure																																																	.																						.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.
		82	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																																													.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																																																													.	.
Query Sequence		L	E	K	N	I	P	Y	M	.	.	.	.	.	.	.	.	.	.	S	G	P	Q	W	L	H	D	F	V	L	R	D	R	W	V	L	A	V	A	G	T	H	G	K	T	T	T	A	G	M	A	T	W	I	L	E	Q	C	G	Y	K	P	G	F	V	I	G	G	V	P	G	N	F	E	V	S	A	H	L	.	.
Query Conservation										.	.	.	.	.	.	.	.	.	.																																																													.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																																													.																.	.
Template Conservation																																																																.
Template Sequence		G	R	A	A	V	P	V	L	V	H	P	A	P	R	G	V	L	G	G	L	A	A	T	V	Y	G	H	P	S	E	R	L	T	V	I	G	I	T	G	T	S	G	K	T	T	T	T	Y	L	V	E	A	G	L	R	A	A	G	R	V	A	G	.	L	I	G	T	I	G	I	R	V	G	G	A	D	L	P	S	A
Template Known Secondary structure		S			S	S						S	S	S												T	T		G	G	G	S	S							S	S	S																T	T					.			S	S	S					T	T						S
Template Predicted Secondary structure																																																																.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
																				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	D	F	F	V	I	E	A	D	E	Y	D	C	A	F	F	D	K	R	S	K	F	V	H	Y	C	P	R	T	L	I	L	N	N	L	E	F	D	H	A	D	I	F	D	D	L	K	A	I	Q	K	Q	F	H	H	L	V	.	R	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																																														.
Template Conservation																														.	.	.	.
Template Sequence		L	T	T	P	E	A	P	T	L	Q	A	M	L	A	A	M	V	E	R	G	V	D	T	V	V	M	E	V	.	.	.	.	S	S	H	A	L	A	L	G	R	V	D	G	T	R	F	A	V	G	A	F	T	N	L	S	R	D	H	L	D	F	H	P	S	M	A	D	Y	F	E	A	A	S	L	F	D	P	D	S
Template Known Secondary structure		S	S	S																T	T									.	.	.	.								T	T	T	T	T				S									S			T	T	T	S	S	S									T	T	T		T	T	S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																.																	.	.	.
Query SS confidence																																.																	.	.	.
Query Sequence		V	P	G	Q	G	R	I	I	W	P	E	N	D	I	N	L	K	Q	T	M	A	M	G	C	W	S	E	Q	E	L	.	V	G	E	Q	G	H	W	Q	A	K	K	L	T	T	D	A	.	.	.	S	E	W	E	V	L	L	D	G	E	K	V	G	E	V	K	W	S	L	V	G	E	H	N	M	H	N	G	L	M
Query Conservation																																.																	.	.	.
Alig confidence																																.																	.	.	.
Template Conservation
Template Sequence		A	L	R	A	R	T	A	V	V	C	I	D	D	D	A	G	R	A	M	A	A	R	A	A	D	A	I	T	V	S	A	A	D	R	P	A	H	W	R	A	T	D	V	A	P	T	D	A	G	G	Q	Q	F	T	A	I	D	P	A	G	V	G	H	H	I	G	I	R	L	P	G	R	Y	N	V	A	N	C	L	V
Template Known Secondary structure		T	T			S							S	S											S	S						S	S	S	S			S										T	T	T									T	T	S								S			S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	A	A	R	H	V	G	V	A	P	A	D	A	A	N	A	L	G	S	F	I	N	A	R	R	R	L	E	L	R	G	E	A	N	G	V	T	V	Y	D	D	F	A	H	H	P	T	A	I	L	A	T	L	A	A	L	R	G	K	V	G	G	T	A	R	I	I	A	V	L	E	P	R	S	N	T	M	K
Query Conservation
Alig confidence																									.							.	.	.	.	.																									.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																									.							.	.	.	.	.																									.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		A	L	A	I	L	D	T	V	G	V	S	P	E	Q	A	V	P	G	L	R	E	I	R	.	V	P	G	R	L	E	.	.	.	.	.	Q	G	F	L	A	L	V	D	Y	A	H	K	P	E	A	L	R	S	V	L	T	T	L	A	.	.	.	.	.	.	H	R	L	A	V	V	F	R	.	.	.	.	.	.	.
Template Known Secondary structure									T	T															.		T	T	S	S	B	.	.	.	.	.												S										T	T		.	.	.	.	.	.									.	.	.	.	.	.	.
Template Predicted Secondary structure																									.							.	.	.	.	.																									.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.						380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.							.	.	.	.	.	.	410	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	I	C	K	D	D	L	A	P	S	L	G	R	A	D	E	V	F	L	L	Q	P	A	H	I	P	W	Q	V	A	E	V	A	E	A	C	V	Q	P	A	H	W	S	G	D	V	D	T	L	A	D	M	V	V	K	T	A	Q	P	G	D	H	I	L	V	M	S	N	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	P	M	G	R	I	A	D	L	V	V	V	T	D	P	.	.	.	.	.	.	.	T	A	I	R	R	E	I	L	A	Q	V	V	E	I	A	D	R	R	D	A	I	R	H	A	V	A	W	A	R	P	G	D	V	V	L	I	A	G	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																S														T	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
										430	.	.	.	.	.	.	.	.	.	440	.	.	.	.								.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.