Job Description P37773 Confidence 98.21% Date Thu Jan 5 11:57:40 GMT 2012 Rank 37 Aligned Residues 132 % Identity 22% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	H	I	L	G	I	C	G	T	F	M	G	G	L	A	M	L	A	R	Q	L	G	H	E	V	T	G	S	D	A	N	V	Y	P	P	M	S	T	L	L	E	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	L	I	Q	G	Y	D	A	S	Q	L	E	P	Q	P
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																		.	.
Template Sequence		M	R	I	S	I	F	G	L	G	Y	V	G	A	.	V	C	A	G	C	L	S	A	R	G	H	E	V	I	G	V	D	.	.	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	S
Template Known Secondary structure										S	T	T			.									T	T								.	.	S										T	T			S	S			T	T											T	T						S								T
Template Predicted Secondary structure															.																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.
Predicted Secondary structure												.	.	.	.	.	.																																	.	.																								.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																	.	.																								.	.	.	.	.
Query Sequence		D	L	V	I	I	G	N	A	M	T	.	.	.	.	.	.	R	G	N	P	C	V	E	A	V	L	E	K	N	I	P	Y	M	S	G	P	Q	W	L	H	D	F	V	L	R	D	R	W	.	.	V	L	A	V	A	G	T	H	G	K	T	T	T	A	G	M	A	T	W	I	L	E	Q	.	.	.	.	.	C	G
Query Conservation												.	.	.	.	.	.																																	.	.																								.	.	.	.	.
Alig confidence												.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.											.	.																								.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	.	.	.	.	.	.	.	.	.	.	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G
Template Known Secondary structure		S										B		T	T	S	S	B												.	.	.	.	.	.	.	.	.	.						T	T			S								S				T	T					T										S			B	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	P	G	F	V	I	G	G	V	P	G	N	F	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	F	G	V	G	T	N	P	E	F	L	R	E	S	T
Template Known Secondary structure		T	T	B											T	T	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions