 |
Job Description | P37773 | Confidence | 94.37% | Date | Thu Jan 5 11:57:40 GMT 2012 |
Rank | 421 | Aligned Residues | 121 |
% Identity | 13% | Template | c1a4iB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / |
PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
|
Resolution | 1.50 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | H | I | L | G | I | C | G | . |
T | F | M | G | G | L | A | M | L | A | R | Q | L | G | H | E | V | T | G | S | D | A | N | V | Y | P | P | M | S | T | L | L | E | K | Q | G | I | E | L | I | Q | G | Y | D | A | S | Q | L | E | P | Q | . |
. |
. |
P | D | L | V | I | I | G | N | A | M | T | R | G | N | P | C |
Query Conservation |   |
  |
|   |   |   |
|   |
|   | . |   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |
|
|   |
|
|
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |
|
|   | . |
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|   | . |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
Template Sequence |   |
H | A | V | V | V | G | R | S | K | I | V | G | A | . |
P | M | H | D | L | L | L | W | N | N | A | T | V | T | T | C | H | S | K | T | A | . |
H | L | D | E | E | V | N | K | G | D | I | L | V | V | A | T | G | Q | P | E | M | V | K | G | E | W | I | K | P | G | A | I | V | I | D | C | G | I | N | Y | V | P | D | D |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
| T | T | T |  |  | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T |
| S | . | S |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
| T | T |
| B |
| G | G | G | S |
| T | T |
|  |  |  |  |
|
|
|  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | A | V | L | E | K | N | I | P | Y | M | S | G | P | Q | W | L | H | D | F | V | L | R | D | R | W | V | L | A | V | A | G | T | H | G | K | T | T | T | A | G | M | A | T | W | I | L | E | Q | C |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
| . | . | . |
|
|
|
|
|
| . |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |
|   |
|   |
Template Sequence |   |
K | K | P | N | G | R | K | . |
. |
. |
V | V | G | D | V | A | . |
Y | D | E | A | K | E | R | A | S | F | I | T | P | V | P | G | G | V | G | P | M | T | V | A | M | L | M | Q | S | T | V | E | S | A |
Template Known Secondary structure |   |
T | S | T | T | S |  |  | . | . | . |  |  |
| S | B |
| . |  |  |  |  | T | T | T |
| S |  |  |
|
| T | T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  | . | . | . |  |  |  |
|
|
| . |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | |
|
|
. | . | . | . | . | . | |
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|