Return to main results Retrieve Phyre Job Id

Job DescriptionP75793
Confidence100.00%DateThu Jan 5 12:14:12 GMT 2012
Rank1Aligned Residues782
% Identity38%Templated1r9da_
SCOP infoPFL-like glycyl radical enzymes PFL-like glycyl radical enzymes PFL-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAP
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Template Sequence  FSTQTERINILKAQILN. AKPCVESERAILITESFKQTEGQPAILRRALALKHILENIPITIRDQELIVGSLTKEPRSSQ
Template Known Secondary structure 




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BB

T
TTS
S




TT
SS


SSSSTTBB
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   6...10.........20.. .......30.........40.........50.........60.........70.........80....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  IFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAH
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Template Sequence  VFPEFSNKWLQDELDRLNKRTGDAFQISEESKEKLKDVFEYWNGKTTSELATSYMTEETREAVNCDVFTVGNYYYNGVGH
Template Known Secondary structure 

TTT

TTTGGG
SSS

B

TTT
SS
TSSS
S



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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  LAVNFPLLLEKGLDGLREEVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRRDELLA
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Template Sequence  VSVDYGKVLRVGFNGIINEAKEQLEKNRSIDPDFIKKEKFLNSVIISCEAAITYVNRYAKKAKEIADNTSDAKRKAELNE
Template Known Secondary structure  B


T

S
TTT


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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  MAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLE
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Template Sequence  IAKICSKVSGEGAKSFYEACQLFWFIHAIINIESNGHSISPARFDQYMYPYYEND. . . KN. ITDKFAQELIDCIWIKLND
Template Known Secondary structure  TTS


S


S
B

BS
...SS.

TTT
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   245....250.........260.........270.........280.........290......... 300. ........310.........320
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  VNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIR
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Template Sequence  INKVRDEISTKHFGGYPMYQNLIVGGQNS. . . EGKDATNKVSYMALEAAVHVKLPQPSLSVRIWNKTPDEFLLRAAELTR
Template Known Secondary structure  B




TTS
SS





B
T...TS
B




S
S
TT

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   321........330.........340......... 350.........360.........370.........380.........390.......
 
   406...410.........420.........430.........440.........450.........460.........470.........480.....
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Query Sequence  CGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGHDATSGKVFLPQ
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Template Sequence  EGLGLPAYYNDEVIIPALVSRGLTLEDARDYGIIGCVEPQKPGK. TEGWHDSAFFNLARIVELTINSGFDK. . NKQIGPK
Template Known Secondary structure  TTS


TT

T
TTT
TTS.

TTSTTTB
S..SSB
S

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   398.400.........410.........420.........430.........440. ........450.........460....... ..470....
 
   486...490.........500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  EKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVG
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Template Sequence  TQ. . NFEEMKSFDEFMKAYKAQMEYFVKHMCCADNCIDIAHAERAPLPFLSSMVDNCIGKGKSLQDGGAEYNFSGPQGVG
Template Known Secondary structure 

..
GGG

S


TSTTT

TTTT
SS

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   475. ...480.........490.........500.........510.........520.........530.........540.........550..
 
   566...570.........580.........590.........600.........610.........620.........630.........640.....
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Query Sequence  IANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHN
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Template Sequence  VANIGDSLVAVKKIVFDENKITPSELKKTLNNDFKN. . SEEIQALLKN. APKFGNDIDEVDNLAREGALVYCREVNKYTN
Template Known Secondary structure  TTTS
SS
TTTTT..
T.S

TTS

TT
B
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   553......560.........570.........580........ .590........ .600.........610.........620.........
 
   646...650.........660.........670.........680.........690.........700.........710.........720.....
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Query Sequence  PRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQ
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Template Sequence  PR. . . . . . GGNFQPGLYPSSINVYFGSLTGATPDGRKSGQPLADGVSPSRGCDVSGPTAACNSVSKLDHFIASNGTLFNQ
Template Known Secondary structure  TT......S


BB

TTT



TTS

TT




TTS

TTT

S
TTS
TTT
TT
B

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   630. ........640.........650.........660.........670.........680.........690.........700...
 
   726...730.........740.........750.........760.........770.........780.........790.........800.....
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Query Sequence  KLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDAQDDIIAR
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Template Sequence  KFHPSALKGDNGLMNLSSLIRSYFD. QKGFHVQFNVIDKKILLAAQKNPEKYQDLIVRVAGYSAQFISLDKSIQNDIIAR
Template Known Secondary structure 
GGGG
.TT




GGGGTT

SSSGGGS
S
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   704.....710.........720........ .730.........740.........750.........760.........770.........780..
 
   806...810
Predicted Secondary structure 



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Query Sequence  TEHML
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Template Sequence  TEHVM
Template Known Secondary structure 

B

Template Predicted Secondary structure 



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   783....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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