Email l.a.kelley@imperial.ac.uk Description Q46868 Date Thu Jan 5 12:35:27 GMT 2012 Unique Job ID d2e6312573615073

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1dipA_ 86.2 38 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 2 c3p8cE_ 75.5 31 PDB header:protein binding Chain: E: PDB Molecule:probable protein brick1; PDBTitle: structure and control of the actin regulatory wave complex 3 c3gw6F_ 71.2 31 PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone 4 c1cosA_ 56.7 30 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 5 c1cosB_ 55.6 29 PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 6 c3pp5A_ 55.4 29 PDB header:structural protein Chain: A: PDB Molecule:brk1; PDBTitle: high-resolution structure of the trimeric scar/wave complex precursor2 brk1 7 c1coiA_ 54.0 27 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 8 c1qceB_ 53.4 19 PDB header:viral protein Chain: B: PDB Molecule:protein (gp41); PDBTitle: solution nmr structure of ectodomain of siv gp41,2 restrained regularized mean structure plus 29 simulated3 annealing structures 9 c1cosC_ 52.8 30 PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 10 c2l7kA_ 52.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein cd1104.2 from clostridium difficile,2 northeast structural genomics consortium target cfr130 11 c3p8cD_ 46.8 16 PDB header:protein binding Chain: D: PDB Molecule:wiskott-aldrich syndrome protein family member 1; PDBTitle: structure and control of the actin regulatory wave complex 12 c1aq5C_ 40.7 28 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 13 c2jgoB_ 38.0 26 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 14 c2jgoA_ 38.0 26 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 15 c3ljmC_ 38.0 26 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 16 c3ljmA_ 38.0 26 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 17 c2ergA_ 37.9 27 PDB header:transcription activator/dna Chain: A: PDB Molecule:regulatory protein leu3; PDBTitle: crystal structure of leu3 dna-binding domain with a single2 h50c mutation complexed with a 15mer dna duplex 18 c2jgoC_ 36.6 25 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 19 c3ljmB_ 36.6 25 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 20 c3h5fC_ 34.0 27 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 21 c3h5fB_ not modelled 34.0 27 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 22 c3h5gA_ not modelled 34.0 27 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 23 c3h5gB_ not modelled 34.0 27 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 24 c3h5gC_ not modelled 34.0 27 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 25 c3h5fA_ not modelled 34.0 27 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 26 c1d7mA_ not modelled 33.5 39 PDB header:contractile protein Chain: A: PDB Molecule:cortexillin i; PDBTitle: coiled-coil dimerization domain from cortexillin i 27 d1grja1 not modelled 33.1 29 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 28 c1g6uB_ not modelled 31.7 36 PDB header:de novo protein Chain: B: PDB Molecule:domain swapped dimer; PDBTitle: crystal structure of a domain swapped dimer 29 c3p7kA_ not modelled 31.4 24 PDB header:viral protein Chain: A: PDB Molecule:gp41 peptide; PDBTitle: gp41 peptide 30 c3iynR_ not modelled 30.3 16 PDB header:virus Chain: R: PDB Molecule:hexon-associated protein; PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5 31 d2f23a1 not modelled 29.4 29 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 32 d1ohua_ not modelled 28.9 24 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 33 c1favA_ not modelled 28.4 22 PDB header:viral protein Chain: A: PDB Molecule:hiv-1 envelope protein chimera; PDBTitle: the structure of an hiv-1 specific cell entry inhibitor in complex2 with the hiv-1 gp41 trimeric core 34 c3m06F_ not modelled 27.1 14 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 35 c2kscA_ not modelled 25.8 13 PDB header:unknown function Chain: A: PDB Molecule:cyanoglobin; PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin 36 c2pnvA_ not modelled 25.5 22 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 37 c3a7pB_ not modelled 24.2 24 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 38 c1u0iA_ not modelled 23.7 35 PDB header:de novo protein Chain: A: PDB Molecule:iaal-e3; PDBTitle: iaal-e3/k3 heterodimer 39 c2zfcB_ not modelled 23.3 14 PDB header:viral protein Chain: B: PDB Molecule:hiv-1 gp41; PDBTitle: x-ray crystal structure of an engineered n-terminal hiv-12 gp41 trimer with enhanced stability and potency 40 c3cvfA_ not modelled 19.4 21 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 41 c3efgA_ not modelled 19.1 37 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein slyx homolog; PDBTitle: structure of slyx protein from xanthomonas campestris pv. campestris2 str. atcc 33913 42 c2vrsC_ not modelled 18.9 20 PDB header:viral protein Chain: C: PDB Molecule:sigma-c capsid protein; PDBTitle: structure of avian reovirus sigma c 117-326, c2 crystal form 43 c3rylB_ not modelled 18.6 31 PDB header:protein binding Chain: B: PDB Molecule:protein vpa1370; PDBTitle: dimerization domain of vibrio parahemolyticus vopl 44 c1grjA_ not modelled 17.6 29 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 45 c3bpqC_ not modelled 16.7 29 PDB header:toxin Chain: C: PDB Molecule:antitoxin relb3; PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii 46 c3hnwB_ not modelled 16.3 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 47 d1zy3a1 not modelled 16.0 20 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 48 c2yggA_ not modelled 15.8 40 PDB header:metal binding protein/transport protein Chain: A: PDB Molecule:sodium/hydrogen exchanger 1; PDBTitle: complex of cambr and cam 49 c2kp8A_ not modelled 15.7 27 PDB header:unknown function Chain: A: PDB Molecule:model peptide; PDBTitle: ligand bound to a model peptide that mimics the open2 fusogenic form 50 d2oa5a1 not modelled 15.5 20 Fold:BLRF2-like Superfamily:BLRF2-like Family:BLRF2-like 51 c3pbjF_ not modelled 15.4 39 PDB header:de novo protein Chain: F: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 52 c3pbjB_ not modelled 15.4 39 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 53 c3pbjD_ not modelled 15.3 39 PDB header:de novo protein Chain: D: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 54 c3pbjC_ not modelled 15.3 39 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 55 c3pbjA_ not modelled 15.3 39 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 56 c3c4mA_ not modelled 15.0 16 PDB header:membrane protein Chain: A: PDB Molecule:fusion protein of maltose-binding periplasmic protein and PDBTitle: structure of human parathyroid hormone in complex with the2 extracellular domain of its g-protein-coupled receptor (pth1r) 57 c3dbzB_ not modelled 15.0 15 PDB header:sugar binding protein Chain: B: PDB Molecule:pulmonary surfactant-associated protein d; PDBTitle: human surfactant protein d 58 d1q1va_ not modelled 14.5 27 Fold:Another 3-helical bundle Superfamily:DEK C-terminal domain Family:DEK C-terminal domain 59 d1ivsa1 not modelled 14.4 11 Fold:Long alpha-hairpin Superfamily:tRNA-binding arm Family:Valyl-tRNA synthetase (ValRS) C-terminal domain 60 c2o2fA_ not modelled 14.2 16 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand 61 c2l5gA_ not modelled 13.9 33 PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 62 c1envA_ not modelled 13.9 23 PDB header:viral protein Chain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41 63 c2xa0A_ not modelled 13.6 16 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide 64 c1go4F_ not modelled 13.3 27 PDB header:cell cycle Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1; PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20. 65 c3pbjE_ not modelled 13.3 28 PDB header:de novo protein Chain: E: PDB Molecule:coil ser l9l-pen l23h; PDBTitle: hydrolytic catalysis and structural stabilization in a designed2 metalloprotein 66 c1by0A_ not modelled 13.1 24 PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen 67 c2x6pB_ not modelled 12.5 26 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l19c; PDBTitle: crystal structure of coil ser l19c 68 c2x6pA_ not modelled 12.5 26 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l19c; PDBTitle: crystal structure of coil ser l19c 69 d2p6va1 not modelled 12.4 19 Fold:TAFH domain-like Superfamily:TAFH domain-like Family:TAFH domain-like 70 d1cxzb_ not modelled 12.0 21 Fold:Long alpha-hairpin Superfamily:HR1 repeat Family:HR1 repeat 71 c1x8yA_ not modelled 11.9 31 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 72 c2x6pC_ not modelled 11.8 25 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l19c; PDBTitle: crystal structure of coil ser l19c 73 d1k4ta1 not modelled 11.7 20 Fold:Long alpha-hairpin Superfamily:Eukaryotic DNA topoisomerase I, dispensable insert domain Family:Eukaryotic DNA topoisomerase I, dispensable insert domain 74 d1urfa_ not modelled 11.6 13 Fold:Long alpha-hairpin Superfamily:HR1 repeat Family:HR1 repeat 75 d2rfra1 not modelled 11.2 38 Fold:Cystatin-like Superfamily:NTF2-like Family:BaiE/LinA-like 76 d1pq1a_ not modelled 11.2 17 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 77 d2oa4a1 not modelled 10.9 36 Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:SPO1678-like 78 c2akfB_ not modelled 10.6 34 PDB header:protein binding Chain: B: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 79 c2akfA_ not modelled 10.6 34 PDB header:protein binding Chain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 80 c2akfC_ not modelled 10.6 34 PDB header:protein binding Chain: C: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 81 c3gvmA_ not modelled 10.5 8 PDB header:viral protein Chain: A: PDB Molecule:putative uncharacterized protein sag1039; PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae 82 c2elfA_ not modelled 9.7 29 PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei 83 c2p4vA_ not modelled 9.6 11 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 84 c3exmA_ not modelled 9.4 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase sc4828; PDBTitle: crystal structure of the phosphatase sc4828 with the non-hydrolyzable2 nucleotide gpcp 85 c1kzzA_ not modelled 9.3 25 PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor associated factor 3; PDBTitle: downstream regulator tank binds to the cd40 recognition2 site on traf3 86 c3myrB_ not modelled 9.2 13 PDB header:oxidoreductase Chain: B: PDB Molecule:nickel-dependent hydrogenase large subunit; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 87 c2qnlA_ not modelled 9.1 36 PDB header:signaling protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative dna damage-inducible protein2 (chu_0679) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution 88 c2jrtA_ not modelled 9.1 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: nmr solution structure of the protein coded by gene2 rhos4_12090 of rhodobacter sphaeroides. northeast3 structural genomics target rhr5 89 c2vofA_ not modelled 9.1 16 PDB header:apoptosis Chain: A: PDB Molecule:bcl-2-related protein a1; PDBTitle: structure of mouse a1 bound to the puma bh3-domain 90 c2a5yA_ not modelled 9.0 24 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator ced-9; PDBTitle: structure of a ced-4/ced-9 complex 91 c3m0dC_ not modelled 8.9 22 PDB header:signaling protein Chain: C: PDB Molecule:tnf receptor-associated factor 1; PDBTitle: crystal structure of the traf1:traf2:ciap2 complex 92 c1jekA_ not modelled 8.8 16 PDB header:viral protein Chain: A: PDB Molecule:env polyprotein; PDBTitle: visna tm core structure 93 d2it9a1 not modelled 8.6 12 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:PMN2A0962/syc2379c-like 94 d1pzra_ not modelled 8.5 30 Fold:HLH-like Superfamily:Docking domain B of the erythromycin polyketide synthase (DEBS) Family:Docking domain B of the erythromycin polyketide synthase (DEBS) 95 c1jocA_ not modelled 8.5 15 PDB header:membrane protein Chain: A: PDB Molecule:early endosomal autoantigen 1; PDBTitle: eea1 homodimer of c-terminal fyve domain bound to inositol2 1,3-diphosphate 96 c1p9iA_ not modelled 8.0 19 PDB header:unknown function Chain: A: PDB Molecule:cortexillin i/gcn4 hybrid peptide; PDBTitle: coiled-coil x-ray structure at 1.17 a resolution 97 c3ci9B_ not modelled 7.8 18 PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 98 c2yv6A_ not modelled 7.7 14 PDB header:apoptosis Chain: A: PDB Molecule:bcl-2 homologous antagonist/killer; PDBTitle: crystal structure of human bcl-2 family protein bak 99 c1pyiA_ not modelled 7.6 18 PDB header:transcription/dna Chain: A: PDB Molecule:protein (pyrimidine pathway regulator 1); PDBTitle: crystal structure of a ppr1-dna complex: dna recognition by2 proteins containing a zn2cys6 binuclear cluster