 |
Job Description | P03835 | Confidence | 3.23% | Date | Thu Jan 5 10:58:03 GMT 2012 |
Rank | 93 | Aligned Residues | 37 |
% Identity | 22% | Template | d2v9va2 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| C-terminal fragment of elongation factor SelB
|
Resolution | 1.10 |
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | R | L | G | S | E | A | V | R | R | V | F | T | K | T | A | Q | L | W | H | N | A | T | P | H | P | H | W | C | G | L | T | L | L | A | I | D | G | V | F | W | R | T | P | D |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
R | S | R | Y | F | S | R | L | P | A | R | V | Y | Q | A | L | L | E | E | W | S | R | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | L | Q | L | A | A | N | T | V | A | L | A | G |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | S |  |  |  |
| S | S |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 500 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|