Job Description P03835 Confidence 99.88% Date Thu Jan 5 10:58:03 GMT 2012 Rank 2 Aligned Residues 222 % Identity 17% Template d1b7ea_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Transposase inhibitor (Tn5 transposase) Resolution 2.90

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	Q	L	W	H	N	A	T	P	H	P	H	W	C	G	L	T	L	L	A	I	D	G	V	F	W	R	T	P	D	T	P	E	N	D	A	A	F	P	R	Q	T	H	A	G	N	P	A	L	Y	P	Q	V	K	M	V	C	Q	M	E	L	T	S	H	L	L	T	A	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	A	G	A	M	Q	T	V	K	L	A	Q	E	F	P	E	L	L	A	I	E	D	T	T	S	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	W	V	H	S	V	L	L	L	E	A	T	T	F	R	T	V	G	L	L	H	Q	E	W	W	M	R	P	D
Template Known Secondary structure														T	T		S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T																S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.
Predicted Secondary structure														.	.	.	.	.	.	.																																																							.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.																																																							.	.	.	.	.
Query Sequence		A	F	G	T	M	K	N	S	E	N	E	L	.	.	.	.	.	.	.	A	E	Q	L	I	E	Q	T	G	D	N	T	L	T	L	M	D	K	G	Y	Y	S	L	G	L	L	N	A	W	S	L	A	G	E	H	R	H	W	M	I	P	L	R	K	G	A	Q	Y	E	E	I	R	K	L	.	.	.	.	.	G	K
Query Conservation														.	.	.	.	.	.	.																																																							.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																			.	.																			.	.	.	.	.
Template Conservation																																																							.	.
Template Sequence		D	P	A	D	A	D	E	K	E	S	G	K	W	L	A	A	A	A	T	S	R	L	R	M	G	S	M	M	S	N	V	I	A	V	C	D	R	E	A	D	I	H	A	Y	L	Q	D	K	L	A	H	N	E	.	.	R	F	V	V	R	S	K	H	P	R	K	D	V	E	S	G	L	Y	L	Y	D	H	L	K	N
Template Known Secondary structure		S	G	G	G							T														G	G	G	G	G	G								S	S													T		.	.								S			B		T	T	T		S	B							T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	H	L	V	K	L	K	T	S	P	Q	A	R	K	K	W	P	G	L	G	N	E	V	T	A	R	L	L	T	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	G	K	V	C	H	L	L	T	S	M	T	D	A	M	R	F	P	G	G	E	M	G	D	L	Y
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	E	L	G	G	Y	Q	I	S	I	P	Q	K	G	V	R	P	A	R	K	A	S	L	S	L	R	S	G	R	I	T	L	K	Q	G	N	I	T	L	N	A	V	L	A	E	E	I	N	P	P	K	G	E	T	P	L	K	W	L	L	L	T	S	E	P	V	E	S	L	A	Q	A	L	R	V	I	D	I	Y
Template Known Secondary structure		S																																	S	T	T	S											S	S			S	S	S										S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	R	W	E	I	E	L	G	Y	R	E	I	K	Q	T	M	Q	R	S	R	L	T	L	R	S	K	K	P	E	L	V	E	Q	E	L	W	G	V	L	L	A	Y	N	L	V	R	Y	Q	M	I
Query Conservation
Alig confidence																																		.	.	.
Template Conservation																																		.	.	.
Template Sequence		T	H	R	W	R	I	E	E	F	H	K	A	W	K	T	G	A	G	A	E	R	Q	R	M	P	D	N	L	E	R	M	V	.	.	.	S	I	L	S	F	V	A	V	R	L	L	Q	L	R	E	S
Template Known Secondary structure			T		T														T	T	T	S	S					S						.	.	.
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions