Job Description P03835 Confidence 5.46% Date Thu Jan 5 10:58:03 GMT 2012 Rank 26 Aligned Residues 108 % Identity 11% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	P	S	A	V	I	Q	A	R	Q	R	L	G	S	E	A	V	R	R	V	F	T	K	T	A	Q	L	W	H	N	A	T	P	H	P	H	W	C	G	L	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	A	I	D	G	V	F	W	R	T	P	D	T	P	E	N	D	A	A	F	P	R	Q	T	H
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		I	H	P	N	S	F	F	Q	T	N	.	.	.	.	S	Y	Q	A	V	N	L	V	R	K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E
Template Known Secondary structure				T	T	S				S	B	.	.	.	.																	S	S						T		T	T	T								T	T	T								S															T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	G	N	P	A	L	Y	P	Q	V	K	M	V	C	Q	M	E	L	T	S	H	L	L	T	A	A	A	F	G	T	M	K	N	S	.	E	N	E	L	A	E	Q	L	I	E	Q	T	G	D	N	T	L	T	L
Query Conservation																																				.
Alig confidence		.	.	.	.	.	.	.	.	.																										.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	F	E	V	A	S	D	R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	K	P	G	V	I	V	Y	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T	T	T				T	T		S								T	T		S														S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions