Job Description P03835 Confidence 4.31% Date Thu Jan 5 10:58:03 GMT 2012 Rank 49 Aligned Residues 66 % Identity 21% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		27	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure													.	.	.								.	.
Query SS confidence													.	.	.								.	.
Query Sequence		L	D	P	E	L	I	S	R	C	L	A	.	.	.	E	S	G	T	V	T	L	.	.	R	K	R	R	L	P	L	E	M	M	V	W	C	I	V	G	M	A	L	E	R	K	E	P	L	H	Q	I	V	N	R	L	D	I	M	L	P	G	N	R	P	F	V	A	P	S	A	V	I	Q	A	R	Q	R	L	G
Query Conservation													.	.	.								.	.
Alig confidence													.	.	.								.	.																.																			.	.	.	.	.	.	.
Template Conservation																																								.																			.	.	.	.	.	.	.
Template Sequence		R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	.	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	.	.	.	.	.	.	.	S	A	S	K	R	T	I	L	N	V	I	K	R	S	G
Template Known Secondary structure													S	G	G	G	T	T										S	S											.																T	T		.	.	.	.	.	.	.		S												T
Template Predicted Secondary structure																																								.																			.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions