 |
Job Description | P42632 | Confidence | 28.43% | Date | Thu Jan 5 12:02:00 GMT 2012 |
Rank | 23 | Aligned Residues | 44 |
% Identity | 27% | Template | d1ztda1 |
SCOP info | RNase III domain-like
| RNase III domain-like
| PF0609-like
|
Resolution | 2.00 |
|
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | A | V | K | S | Q | N | G | G | A | M | S | L | G | R | T | A | . |
. |
. |
. |
. |
S | F | L | D | I | Y | I | E | R | D | F | K | A | G | V | L | N | E | Q | Q | A | Q | E | L | I | D |
Query Conservation |   |
|   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|
|
|
|   |
|   |
Template Sequence |   |
L | A | I | A | L | E | L | T | G | L | S | K | N | L | R | R | V | D | K | H | A | K | G | D | Y | A | E | A | L | I | A | K | A | W | L | M | G | L | I | S | E | R | E | A | V | E | I | I | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | G | G | G | G |
|
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|