Return to main results Retrieve Phyre Job Id

Job DescriptionP42632
Confidence12.88%DateThu Jan 5 12:02:00 GMT 2012
Rank49Aligned Residues182
% Identity18%Templated1rlra2
SCOP infoPFL-like glycyl radical enzymes PFL-like glycyl radical enzymes R1 subunit of ribonucleotide reductase, C-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   386...390.........400.........410........ .420.........430........ .440.........450.........
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Query Sequence  IAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDD. . . . . YAIACCVSPMVIGKQMQFFG. ARANLAKTLLYAINGGVDEKL
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Template Sequence  VELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAI. . .
Template Known Secondary structure  S
SSSB
TTTS





TTS





B

SSTT
TT
B

TTS
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   396...400.........410.........420.........430.........440.........450.........460.........470..
 
   460.........470.........480.........490.........500.........510.........520.........530.........
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Query Sequence  KIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATD
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Template Sequence  . . . . . . . . . . . . NNLDELDELAILAVRALDALLDYQDYPIPAAKRGAMGRRTL. . . . . . . . . . . . . . . GIGVINFAYYLA
Template Known Secondary structure  ............SSGGGS

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   473......480.........490.........500.........510... ......520.....
 
   540.........550.........560.........570.........580......... 590.........600........
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Query Sequence  SLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERF. . . . . . . . . . . MKKIKALPTYRNAVPTQSI
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Template Sequence  KHG. . . . . . . . . . . . . . . . . . . . . . . . . . KRYSDG. . SANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGI
Template Known Secondary structure  TT..........................

SSSS..TT


TTGGGBGGGGT
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   526.. .530.... .....540.........550.........560.........570.......
 
   609610.........620.....
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Query Sequence  LTITSNVVYGQKTGNTP
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Template Sequence  LPIDTYKKDLDTIANEP
Template Known Secondary structure 
S
GGGGGT



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   578.580.........590....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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