Job Description P42632 Confidence 100.00% Date Thu Jan 5 12:02:00 GMT 2012 Rank 2 Aligned Residues 611 % Identity 77% Template d1qhma_ SCOP info PFL-like glycyl radical enzymes PFL-like glycyl radical enzymes PFL-like Resolution 2.80

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	Y	A	D	A	W	L	G	F	K	G	T	D	W	K	N	E	I	N	V	R	D	F	I	Q	H	N	Y	T	P	Y	E	G	D	E	S	F	L	A	E	A	T	P	A	T	T	E	L	W	E	K	V	M	E	G	I	R	I	E	N	A	T	H	A	P	V	D	F	D	T	N	I	A	T	T	I	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	K	L	A	T	A	W	E	G	F	T	K	G	D	W	Q	N	E	V	N	V	R	D	F	I	Q	K	N	Y	T	P	Y	E	G	D	E	S	F	L	A	G	A	T	E	A	T	T	T	L	W	D	K	V	M	E	G	V	K	L	E	N	R	T	H	A	P	V	D	F	D	T	A	V	A	S	T	I	T	S
Template Known Secondary structure									T	T	T				S	G	G	G	T	S										S								G	G	G																										T	S		S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	A	G	Y	I	N	Q	P	L	E	K	I	V	G	L	Q	T	D	A	P	L	K	R	A	L	H	P	F	G	G	I	N	M	I	K	S	S	F	H	A	Y	G	R	E	M	D	S	E	F	E	Y	L	F	T	D	L	R	K	T	H	N	Q	G	V	F	D	V	Y	S	P	D	M	L	R	C	R	K	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	A	G	Y	I	N	K	Q	L	E	K	I	V	G	L	Q	T	E	A	P	L	K	R	A	L	I	P	F	G	G	I	K	M	I	E	G	S	C	K	A	Y	N	R	E	L	D	P	M	I	K	K	I	F	T	E	Y	R	K	T	H	N	Q	G	V	F	D	V	Y	T	P	D	I	L	R	C	R	K	S	G
Template Known Secondary structure		S					S		T	T	T		S	S				S	S	S	S	T	T						G	G	G												T	T														T	S																						T
Template Predicted Secondary structure
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	T	G	L	P	D	G	Y	G	R	G	R	I	I	G	D	Y	R	R	V	A	L	Y	G	I	S	Y	L	V	R	E	R	E	L	Q	F	A	D	L	Q	S	R	L	E	K	G	E	D	L	E	A	T	I	R	L	R	E	E	L	A	E	H	R	H	A	L	L	Q	I	Q	E	M	A	A	K	Y	G	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T	G	L	P	D	A	Y	G	R	G	R	I	I	G	D	Y	R	R	V	A	L	Y	G	I	D	Y	L	M	K	D	K	L	A	Q	F	T	S	L	Q	A	D	L	E	N	G	V	N	L	E	Q	T	I	R	L	R	E	E	I	A	E	Q	H	R	A	L	G	Q	M	K	E	M	A	A	K	Y	G	Y	D
Template Known Secondary structure		S							S	S									T																					T	T							T	T	T																												T	T
Template Predicted Secondary structure
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	P	A	Q	N	A	Q	E	A	V	Q	W	L	Y	F	A	Y	L	A	A	V	K	S	Q	N	G	G	A	M	S	L	G	R	T	A	S	F	L	D	I	Y	I	E	R	D	F	K	A	G	V	L	N	E	Q	Q	A	Q	E	L	I	D	H	F	I	M	K	I	R	M	V	R	F	L	R	T	P	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	G	P	A	T	N	A	Q	E	A	I	Q	W	T	Y	F	G	Y	L	A	A	V	K	S	Q	N	G	A	A	M	S	F	G	R	T	S	T	F	L	D	V	Y	I	E	R	D	L	K	A	G	K	I	T	E	Q	E	A	Q	E	M	V	D	H	L	V	M	K	L	R	M	V	R	F	L	R	T	P	E	Y
Template Known Secondary structure			S	S				S																						T	T				B	S														T	T	T	S	S																									G	G	G
Template Predicted Secondary structure
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	L	F	S	G	D	P	I	W	A	T	E	V	I	G	G	M	G	L	D	G	R	T	L	V	T	K	N	S	F	R	Y	L	H	T	L	H	T	M	G	P	A	P	E	P	N	L	T	I	L	W	S	E	E	L	P	I	A	F	K	K	Y	A	A	Q	V	S	I	V	T	S	S	L	Q	Y	E	N	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	L	F	S	G	D	P	I	W	A	T	E	S	I	G	G	M	G	L	D	G	R	T	L	V	T	K	N	S	F	R	F	L	N	T	L	Y	T	M	G	P	S	P	E	P	N	M	T	I	L	W	S	E	K	L	P	L	N	F	K	K	F	A	A	K	V	S	I	D	T	S	S	L	Q	Y	E	N	D	D
Template Known Secondary structure		S	T	T	T	T													B		T	T	S		B																S				S	S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		1324	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	T	D	F	N	S	D	D	Y	A	I	A	C	C	V	S	P	M	V	I	G	K	Q	M	Q	F	F	G	A	R	A	N	L	A	K	T	L	L	Y	A	I	N	G	G	V	D	E	K	L	K	I	Q	V	G	P	K	T	A	P	L	M	D	D	V	L	D	Y	D	K	V	M	D	S	L	D	H	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	R	P	D	F	N	N	D	D	Y	A	I	A	C	C	V	S	P	M	I	V	G	K	Q	M	Q	F	F	G	A	R	A	N	L	A	K	T	M	L	Y	A	I	N	G	G	V	D	E	K	L	K	M	Q	V	G	P	K	S	E	P	I	K	G	D	V	L	N	Y	D	E	V	M	E	R	M	D	H	F	M
Template Known Secondary structure								T		S						T	T	S					T	T	T																				T	T	T			T	T	T	T				S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		1404	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	L	A	V	Q	Y	I	S	A	L	N	I	I	H	Y	M	H	D	K	Y	S	Y	E	A	S	L	M	A	L	H	D	R	D	V	Y	R	T	M	A	C	G	I	A	G	L	S	V	A	T	D	S	L	S	A	I	K	Y	A	R	V	K	P	I	R	D	E	N	G	L	A	V	D	F	E	I	D	G	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	L	A	K	Q	Y	I	T	A	L	N	I	I	H	Y	M	H	D	K	Y	S	Y	E	A	S	L	M	A	L	H	D	R	D	V	I	R	T	M	A	C	G	I	A	G	L	S	V	A	A	D	S	L	S	A	I	K	Y	A	K	V	K	P	I	R	D	E	D	G	L	A	I	D	F	E	I	E	G	E	Y
Template Known Secondary structure																														T	T	S		S	S											S														S								T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		1484	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Y	G	N	N	D	E	R	V	D	S	I	A	C	D	L	V	E	R	F	M	K	K	I	K	A	L	P	T	Y	R	N	A	V	P	T	Q	S	I	L	T	I	T	S	N	V	V	Y	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	F	G	N	N	D	P	R	V	D	D	L	A	V	D	L	V	E	R	F	M	K	K	I	Q	K	L	H	T	Y	R	D	A	I	P	T	Q	S	V	L	T	I	T	S	N	V	V	Y	G	K
Template Known Secondary structure				S	S	S	S																				T	T	S			G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		1564	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.