Job Description P42632 Confidence 30.98% Date Thu Jan 5 12:02:00 GMT 2012 Rank 22 Aligned Residues 172 % Identity 16% Template c3r1rB_ PDB info PDB header:complex (oxidoreductase/peptide) Chain: B: PDB Molecule:ribonucleotide reductase r1 protein; PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli Resolution 3.00 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410						.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	F	K	K	Y	A	A	Q	V	S	I	V	T	S	S	L	Q	Y	E	N	D	D	L	M	.	.	.	.	.	R	T	D	F	N	S	D	D	Y	A	I	A	C	C	V	S	P	M	V	I	.	.	.	.	.	.	.	.	.	.	.	G	K	Q	M	Q	F	F	G	A	R	A	N	L	A	K	T	L	L	Y
Query Conservation																											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	E	L	F	S	L	M	M	Q	E	R	A	S	T	G	R	I	Y	I	Q	N	V	D	H	C	N	T	H	S	P	F	D	P	A	I	A	P	V	R	Q	S	N	L	C	L	E	I	A	L	P	T	K	P	L	N	D	V	N	D	E	N	G	E	I	A	L	C	T	L	S	A	F	N	L	G	A	I	.	.	.
Template Known Secondary structure																S													T	S	S	B		T	T	T	S							T	T	S							B			S	S	T	T		T	T		B											T	T	S		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	G	G	V	D	E	K	L	K	I	Q	V	G	P	K	T	A	P	L	M	D	D	V	L	D	Y	D	K	V	M	D	S	L	D	H	F	M	D	W	L	A	V	Q	Y	I	S	A	L	N	I	I	H	Y	M	H	D	K	Y	S	Y	E	A	S	L	M	A	L	H	D	R	D	V	Y	R	T	M	A	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	L	D	E	L	E	E	L	A	I	L	A	V	R	A	L	D	A	L	L	D	Y	Q	D	Y	P	I	P	A	A	K	R	G	A	M	G	R	R	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G																			S			S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.																.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.												.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	A	G	L	S	V	A	T	D	S	L	S	A	I	K	Y	A	R	V	K	P	I	R	D	E	N	G	L	A	V	D	F	E	I	D	G	E	Y	P	Q	Y	G	N	N	D	E	R	V	D	S	I	A	C	D	L	V	E	R	F	M	K	.	.	.	.	.	.	.	.	.	.	.	K	I	K	A	L	P	T
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	I	N	F	A	Y	Y	L	A	K	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	Y	S	D	G	S	A	N	N	L	T	H	K	T	F	E	A	I	Q	Y	Y	L	L	K	A	S	N	E	L	A	K	E	Q	G	A	C	P	W
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T	S	T	T																														G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.																													.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	N	A	V	P	T	Q	S	I	L	T	I	T	S	N	V	V	Y	G	Q	K	T	G	N	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	E	T	T	Y	A	K	G	I	L	P	I	D	T	Y	K	K	D	L	D	T	I	A	N	E	P
Template Known Secondary structure		G	G	G	B	T	T	T	T	T							S		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions