Job Description P42632 Confidence 8.05% Date Thu Jan 5 12:02:00 GMT 2012 Rank 98 Aligned Residues 112 % Identity 10% Template c3jvdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcription regulation repressor (laci2 family) from corynebacterium glutamicum Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		I	N	M	I	K	S	S	F	H	A	Y	G	R	E	M	D	.	.	.	.	S	E	F	E	Y	L	F	T	D	L	R	K	T	H	N	Q	G	V	F	D	V	Y	S	P	D	M	L	R	C	R	K	S	G	V	L	T	G	L	P	D	G	Y	G	R	G	R	I	I	G	D	Y	R	R	V	A	L	Y	G	I	S
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		L	Q	T	I	Q	Q	D	L	K	A	A	G	Y	Q	M	L	V	A	E	A	N	S	V	Q	A	Q	D	V	V	M	E	S	L	I	S	I	Q	A	A	G	I	I	H	V	P	V	V	G	S	I	A	E	G	I	P	M	V	Q	L	T	R	P	G	F	P	R	V	L	C	D	D	E	A	G	F	F	Q	L	T	E
Template Known Secondary structure													T										S															T		S								T	T						S										S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	V	R	E	R	E	L	Q	F	A	D	L	Q	S	R	L	E	K	G	E	D	L	E	A	T	I	R	L	R	E	E	L	A	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	L	G	G	S	G	M	N	I	A	A	L	V	G	E	E	S	L	S	T	T	Q	E	R	M	R	G	I	S	H	A	A	S	I	Y
Template Known Secondary structure						S	S	S								S		T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions