Return to main results Retrieve Phyre Job Id

Job DescriptionP42632
Confidence8.66%DateThu Jan 5 12:02:00 GMT 2012
Rank84Aligned Residues43
% Identity12%Templatec2pmzV_
PDB info PDB header:translation, transferaseChain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320.........330.........340...
Predicted Secondary structure 























Query SS confidence 










































Query Sequence  LNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVI
Query Conservation 

 


 



 
 

       
         
    
 


Alig confidence 










































Template Conservation 

 

   

  
 
   


 
  




 
 
 
 





Template Sequence  LNIDEAYKILKELGIRPEQLPWIRASDPVARSINAKPGDIIRI
Template Known Secondary structure 

TTTTT

TTSSS


TT
TTTTTTT

TTS
B
Template Predicted Secondary structure 

















Template SS confidence 










































   23......30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions