Job Description P42632 Confidence 20.93% Date Thu Jan 5 12:02:00 GMT 2012 Rank 25 Aligned Residues 139 % Identity 12% Template c1pemA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 2 alpha PDBTitle: ribonucleotide reductase protein r1e from salmonella2 typhimurium Resolution 2.99 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430																.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	F	K	K	Y	A	A	Q	V	S	I	V	T	S	S	L	Q	Y	E	N	D	D	L	M	R	T	D	F	N	S	D	D	Y	A	I	A	C	.	.	C	V	S	P	M	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Q	M	Q	F	F	G	A	R	A	N	L	A	K	T	L	L
Query Conservation																																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		R	D	F	F	Q	T	L	A	E	I	Q	F	E	S	G	Y	P	Y	I	M	F	E	D	T	V	N	R	A	N	P	I	A	G	R	I	N	M	S	N	L	C	S	E	I	L	Q	V	N	S	A	S	R	Y	D	D	N	L	D	Y	T	H	I	G	H	D	I	S	C	N	L	G	S	L	N	I	A	H	V	M	.
Template Known Secondary structure																S																S	S	S							T	T	S							B						T	T	S							B																.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Y	A	I	N	G	G	V	D	E	K	L	K	I	Q	V	G	P	K	T	A	P	L	M	D	D	V	L	D	Y	D	K	V	M	D	S	L	D	H	F	M	D	W	L	A	V	Q	Y	I	S	.	A	L	N	I	I	H	Y	M	H	D	K	Y	S	Y	E	A	S	L	M	A	L	H	D	R	D	V	Y	R	T	M
Query Conservation																																																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	P	D	I	G	R	T	V	E	T	A	I	R	G	L	T	A	V	S	D	M	S	H	I	R	S	V	P	S	I	A	A	G	N	A	A	S	H	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S																							T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	G	I	A	G	L	S	V	A	T	D	S	L	S	A	I	K	Y	A	R	V	K	P	I	R	D	E	N	G	L	A	V	D	F	E	I	D	G	E	Y	P	Q	Y	G	N	N	D	E	R	V	D	S	I	A	C	D	L	V	E	R	F	M	K	K
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	G	Q	M	N	L	H	G	Y	L	A	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	Y	G	S	P	E	A	L	D	F	T	N	L	Y	F	Y	T	I	T	W	H
Template Known Secondary structure															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.																													.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions