Return to main results Retrieve Phyre Job Id

Job DescriptionP31473
Confidence99.83%DateThu Jan 5 11:48:01 GMT 2012
Rank23Aligned Residues219
% Identity19%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KGLYERSHAIRLCLLAAL. . . . . . . . . . . . . . SGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGP
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Template Sequence  KDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA. NVPFFHISGSDFV. . . . . ELF
Template Known Secondary structure  GG

S

TTTT



S

TTSS.T

GGGTT.....T

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Query Sequence  LSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLE
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Template Sequence  VGVGAARVRDLFAQAKAH. . . APCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFDSKE. . . . GIIVMAATNRPDILDPAL
Template Known Secondary structure  TTT...
STGGGT



S
GGG....TS
GGGS
GGG
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   235....240.........250.. .......260.........270.........280......... 290.........300.......
 
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Query Sequence  ALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDA
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Template Sequence  LRPGRFDKKIVVDPPDMLGRKKIL. . . . . . . . . . . . . . . . . . . . . . . . . . EIHTRNKPLAEDV. . . . . . . . NLEIIAKRT
Template Known Secondary structure  GSTTSS





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B
TT
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   317..320.........330.........340 .........350... ......360..
 
   246...250.........260.........270.........280.....
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Query Sequence  PYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLW
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Template Sequence  PGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVI
Template Known Secondary structure  TT

TT
SSB

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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