Return to main results Retrieve Phyre Job Id

Job DescriptionP31473
Confidence99.89%DateThu Jan 5 11:48:01 GMT 2012
Rank14Aligned Residues244
% Identity22%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30....... ..40.........50.........60.........70.....
Predicted Secondary structure 


................


















Query SS confidence 

























. . . . . . . . . . . . . . . .





































Query Sequence  SRLSSSLEKGLYERSHAIRLCLLAAL. . . . . . . . . . . . . . . . SGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTR
Query Conservation        
               
   ................ 
  


 







 

                 
 
Alig confidence 

























................

























.










Template Conservation        
   



  
   
   
                     


 







 


 

  
.           
Template Sequence  REIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. NAPFIKVEATK
Template Known Secondary structure  TT

S
TTSS







TTSS.T

GGG
Template Predicted Secondary structure 



















.





Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.... .....80.....
 
   76...80.........90.........100.........110.........120 .........130.........140...
Predicted Secondary structure 





























............




Query SS confidence 












































. . . . . . . . . . . .






















Query Sequence  FSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAG. . . . . . . . . . . . PAILNTLLTAINERQFRNGAHVE
Query Conservation          
                         






    ............      

  
 
          
Alig confidence 





























.













............






















Template Conservation                                .   
   

                       

  

           
Template Sequence  FTEVGYVGKEVDSIIRDLTDSAGGAIDAVE. QNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMV
Template Known Secondary structure  GSS

SGGGSTTTTTT
.

GGGGS

SS

SS

TT
Template Predicted Secondary structure 





.






















Template SS confidence 















































































   86...90.........100.........110..... ....120.........130.........140.........150.........160....
 
   144.....150.........160.... .....170.........180.........190.........200.........210.........220..
Predicted Secondary structure 













.






















Query SS confidence 




















.

























































Query Sequence  KIPMRLLVAASNELPEADSSL. EALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEI
Query Conservation        

 

   
      .  
 


     
           
                 
               
Alig confidence 




















.
























...........





















Template Conservation      
  
                   
                 
 ...........      
               
Template Sequence  KTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERIL. . . . . . . . . . . TEPHASLTEQYKALMATEGVNI
Template Known Secondary structure 
TT


SSS
GGGS
T






...........SSTT
TT
Template Predicted Secondary structure 






















...........




Template SS confidence 















































































   299300.........310.........320.........330.........340..... ....350.........360.......
 
   223......230.........240.........250.........260.........270
Predicted Secondary structure 











Query SS confidence 















































Query Sequence  TLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRS
Query Conservation           
  
             
 
       
    
   

 
Alig confidence 

























..



















Template Conservation        
  
                ..
 
   
             
Template Sequence  AFTTDAVKKIAEAAFRVNEKTENIGA. . RRLHTVMERLMDKISFSASD
Template Known Secondary structure 
S


TT..SGGG
Template Predicted Secondary structure 













..
Template SS confidence 















































   368.370.........380.........390... ......400.........410...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions