Return to main results Retrieve Phyre Job Id

Job DescriptionP31473
Confidence99.98%DateThu Jan 5 11:48:01 GMT 2012
Rank5Aligned Residues267
% Identity16%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30........ .40.........50.........60... ......70.........80.........90.
Predicted Secondary structure 



..








......



















Query SS confidence 


















. .
























. . . . . .



























Query Sequence  KGLYERSHAIRLCLLAALS. . GESVFLLGPPGIAKSLIARRLKFAF. . . . . . QNARAFEYLMTRFSTPEEVFGPLSIQAL
Query Conservation                
    ..
  


 







 

       ......          
         
       
Alig confidence 


















..
























......













...










Template Conservation    




  
  
  
        


 







 


 

  
                    ...           
Template Sequence  SAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIP. . . DWATVLSTNVI
Template Known Secondary structure  GGS
S

GGG



GGG
TTS

TT
TT

SSGGGS
...TT


S


Template Predicted Secondary structure 






















...




Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80......... 90.........100
 
   92.......100....... ..110.........120.........130........ .140.
Predicted Secondary structure 











............................









..

Query SS confidence 















. . . . . . . . . . . . . . . . . . . . . . . . . . . .






























. .


Query Sequence  KDEGRYERLTSGYLPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . AEIVFLDEIWKAGPAILNTLLTAINERQFRN. . GAH
Query Conservation                  ............................  






          

  
 
     ..   
Alig confidence 















............................






























..


Template Conservation                   
                   
    
   
   

           

  
 
          
Template Sequence  RKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGL
Template Known Secondary structure 



TT




GGG

TTTTGGGS
S

TT
Template Predicted Secondary structure 



































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   142.......150.........160.........170.........180.........190.........200.........210. ....
Predicted Secondary structure 



































......
Query SS confidence 





































































. . . . . .



Query Sequence  VEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEE. . . . . . YERW
Query Conservation          

 

   
        
 


     
           
                 
    ......    
Alig confidence 

















.


















































......



Template Conservation            

      .      
  
    
 
  
        
                               
Template Sequence  SIRHPARFVLVGSGNPEE. GDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEA
Template Known Secondary structure 



S
S.



TT
S




S
Template Predicted Secondary structure 











.













Template SS confidence 















































































   181........190........ .200.........210.........220.........230.........240.........250.........
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  QKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQ
Query Conservation                  
  
             
 
       
    
   

  
   
   
 
 
    
    
 
Alig confidence 
























......
















































Template Conservation                  
        ......  
 
    

  
   
   
   
   

  
   

 

       
Template Sequence  RERLPKVEAPNTALYDCAALCIALG. . . . . . SDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTV
Template Known Secondary structure  GGG
B

SS......S
STT
SB

GGG


Template Predicted Secondary structure 







......















Template SS confidence 















































































   260.........270.........280.... .....290.........300.........310.........320.........330...
 
   296
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   346
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions