Return to main results Retrieve Phyre Job Id

Job DescriptionP31473
Confidence99.66%DateThu Jan 5 11:48:01 GMT 2012
Rank52Aligned Residues205
% Identity15%Templated1e32a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30........ .40.........50.........60.........70.........80....
Predicted Secondary structure 



...............





















Query SS confidence 


















. . . . . . . . . . . . . . .













































Query Sequence  KGLYERSHAIRLCLLAALS. . . . . . . . . . . . . . . GESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFG
Query Conservation                
    ...............
  


 







 

                 
         
Alig confidence 


















...............
























.












.......
Template Conservation   



    
  
   
                    


 







 

  

   .             .......
Template Sequence  DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET. GAFFFLINGPEIM. . . . . . .
Template Known Secondary structure  GG

S
S









TTSST.T

T.......
Template Predicted Secondary structure 


















.






.......
Template SS confidence 















































































   204.....210.........220.........230.........240.........250.........260.. .......270.....
 
   85....90.........100.........110......... 120.........130.........140.........150...
Predicted Secondary structure 
























...........









Query SS confidence 


































. . . . . . . . . . .

































Query Sequence  PLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKA. . . . . . . . . . . GPAILNTLLTAINERQFRNGAHVEKIPMRLLVAA
Query Conservation                           






   ...........       

  
 
                

 
Alig confidence  .

































...........



















.........




Template Conservation  .                         
  
  
                                 .........  

 
Template Sequence  . SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAH. . . . . . . . . VIVMA
Template Known Secondary structure  .TS
TTT
SSSGGGT




TTT


SS
.........
Template Predicted Secondary structure  .

























.........
Template SS confidence 















































































   276...280.........290.........300.........310.........320.........330.........340 .....
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIF
Query Conservation 
   
        
 


     
           
                 
                        
 
Alig confidence 
















































...............................
Template Conservation   
              
    
    
    
  
    
         ...............................
Template Sequence  ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
GGGS
GGGTSTTSS





TTTTS
B
TT
...............................
Template Predicted Secondary structure 
























...............................
Template SS confidence 















































































   346...350.........360.........370.........380.........390....
 
   234.....240.........250.........260.........270......
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  MLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
Query Conservation   
             
 
       
    
   

  
   
Alig confidence  ...







































Template Conservation  ... 
      
 
    

  

  
   
            
Template Sequence  . . . DLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED
Template Known Secondary structure  ...

TT




S
Template Predicted Secondary structure  ...





Template SS confidence 










































   395....400.........410.........420.........430....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions