Job Description P31473 Confidence 99.78% Date Thu Jan 5 11:48:01 GMT 2012 Rank 28 Aligned Residues 218 % Identity 15% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.														.	.	.	.	.	.	.
Template Conservation																																																													.														.	.	.	.	.	.	.
Template Sequence		E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	.	N	A	T	F	I	R	V	V	G	S	E	L	V	.	.	.	.	.	.	.
Template Known Secondary structure		G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	.	T								G	G	G	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.														.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation		.																																																																.	.	.	.	.	.	.	.	.
Template Sequence		.	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	F	.	.	.	.	.	.	.	.	.	D	A	R	G	D	V	K
Template Known Secondary structure		.			S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	S	.	.	.	.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure		.																																																																.	.	.	.	.	.	.	.	.
Template SS confidence
			242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.										.	.	.	.	.	310	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L	D	K	V	Q	D	K	A	N	F	R	S	M	L	T	S	Q	Q	D	E	N	D	N	P	V	P	D	A	L	Q	V	T	D	E	E	Y	E	R	W	Q	K	E	I	G	E	I	T	L	P	D	H	V	F	E
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	G	A	T	N	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	R	K	M	N	L	A	E	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	G	G	G	B						S	T	T	S																						T	T	T	T	S		B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	F	M	L	R	Q	Q	L	D	K	L	P	D	A	P	Y	V	S	D	R	R	W	K	K	A	I	R	L	L	Q	A	S	A	F	F	S	G	R	S	A	V	A	P	V	D	L	I	L	L	K	D	C	L	W	Y	D	A	Q
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	L	E	E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K	I	M	E	K	K	K
Template Known Secondary structure		.	.	.	.	.	.							T	T	S	T	T																				T	T		S	S	B																	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions