Job Description P31473 Confidence 99.97% Date Thu Jan 5 11:48:01 GMT 2012 Rank 6 Aligned Residues 263 % Identity 17% Template c3f9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase Resolution 4.35 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40														.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	S	S	L	E	K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	I	S	S	I	A	P	S	I	Y	G	H	W	E	L	K	E	A	L	A	L	A	L	F	G	G	V	P	K	V	L	E	D	T	R	I	R	G	D	I	H	I	L	I	I	G	D	P	G	T	A	K	S	Q	M	L	Q	F	I	S	R	V	A	P	R	A	V	Y	T	T	G	K	G	S	T	A	.	.	.	.
Template Known Secondary structure						T	S	S	T	T	S										T	T	T	T	T							T	T	T	T					S								S	S			T							S	S	S	T	T		S							T	T		S	T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																														.	.																															.	.
Query SS confidence																														.	.																															.	.
Query Sequence		E	V	F	G	P	L	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	Y	L	P	E	A	.	.	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	.	.	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E
Query Conservation																														.	.																															.	.
Alig confidence		.	.																											.	.																															.	.
Template Conservation		.	.
Template Sequence		.	.	A	G	L	T	A	A	V	V	R	E	K	G	T	G	E	Y	Y	L	E	A	G	A	L	V	L	A	D	G	G	I	A	V	I	D	E	I	D	K	M	R	D	E	D	R	V	A	I	H	E	A	M	E	Q	Q	T	V	S	I	A	K	A	G	I	V	A	K	L	N	A	R	A	A	V	I	A	A	G	N
Template Known Secondary structure		.	.	T	T	S					S	S	G	G	G	T	S	S		S										S	S	S					T	T	T	T				S												S	S	S					S	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		157	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.
Query Sequence		L	P	E	A	D	.	.	.	.	.	.	.	.	.	.	.	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L	D	K	V	Q	D	K	A	N	F	R	S	M	L	T	S	Q	Q	D	E	N	D	N	P	V	P	D	A	L	Q	V	T	D	E	E	Y	E	R	W	Q	K	E	I	.	.	.	G	E	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																						.	.																																				.	.	.
Template Conservation																																							.	.
Template Sequence		P	K	F	G	R	Y	I	S	E	R	P	V	S	D	N	I	N	L	P	P	T	I	L	S	R	F	D	L	I	F	I	L	K	D	Q	P	G	.	.	E	Q	D	R	E	L	A	N	Y	I	L	D	V	H	S	G	K	S	T	K	N	I	I	D	I	D	T	L	R	K	Y	I	A	Y	A	R	K	Y	V	T	P
Template Known Secondary structure			T	T			S		T	T	S		S		T	T	T		S		S	S	S	G	G	G		S								T	T		.	.												T	T	T				S	S	S	S	T	T			T	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		T	L	P	D	H	V	F	E	L	I	F	M	L	R	Q	Q	L	D	K	L	P	D	.	.	.	.	.	A	P	Y	V	S	D	R	R	W	K	K	A	I	R	L	L	Q	A	S	A	F	F	S	G	R	S	A	V	A	P	V	D	L	I	L	L	K	D	C	L
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		K	I	T	S	E	A	K	N	L	I	T	D	F	F	V	E	M	R	K	K	S	S	E	T	P	D	S	P	I	L	I	T	P	R	Q	L	E	A	L	I	R	I	S	E	A	Y	A	K	M	A	L	K	A	E	V	T	R	E	D	A	E	R	A	I	N	I	M
Template Known Secondary structure							T									T	T	S	S		S			B		S	S	S		B		S	S	T	T	T	T	T												T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions