Job Description P31473 Confidence 97.97% Date Thu Jan 5 11:48:01 GMT 2012 Rank 131 Aligned Residues 139 % Identity 11% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P	L	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	.	.	.	.	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R
Template Known Secondary structure		T	S							S	S	S	S	S														T	T	S								S	S								.	.	.	.					T			G	G	G							S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
			106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		.	P	E	A	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	.	.	.	.	.	.	.	.	.	.	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R
Query Conservation		.																						.	.	.	.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A
Template Known Secondary structure		S	S	S									G	G	G													S	S	G	G	G	S								T	T						T	T	T	T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		175	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	L	D	K	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	G	E	N	V
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions