Job Description P31473 Confidence 99.79% Date Thu Jan 5 11:48:01 GMT 2012 Rank 26 Aligned Residues 205 % Identity 18% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.														.	.	.	.	.
Template Conservation																																																												.														.	.	.	.	.
Template Sequence		T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	S	A	T	F	L	N	I	S	A	A	S	L	T	.	.	.	.	.	S	K	Y
Template Known Secondary structure		G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	T								S	T	T	T	S	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																												.														.	.	.	.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.						.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		L	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	K	A	.	.	.	.	.	.	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E
Query Conservation																																				.	.	.	.	.	.
Alig confidence																				.	.	.														.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	.	.	.	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	.	.	.	.	.	.	.	.	.	.	.	.	L	P	R	I	V	V	L	A	A	T	N	R	P	Q
Template Known Secondary structure			S																T	.	.	.		S							T	G	G	G	T	S	B					S														.	.	.	.	.	.	.	.	.	.	.	.											S		G	G
Template Predicted Secondary structure																				.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.				.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.													.	.	610	.	.	.	.	.	.	.	.	.	620	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L	D	K	V	Q	D	K	A	N	F	R	S	M	L	T	S	Q	Q	D	E	N	D	N	P	V	P	D	A	L	Q	V	T	D	E	E	Y	E	R	W	Q	K	E	I	G	E	I	T	L	P	D	H	V	F	E	L	I	F	M	L	R	Q	Q	L
Query Conservation
Alig confidence						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		E	L	D	E	.	.	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	L	L	Q	K	Q	G	S	P	L	D	T	E	A	L	.	.	.	.	.	.	.	R
Template Known Secondary structure		G	B			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	S			S						.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		633	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660																											.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.								.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		D	K	L	P	D	A	P	Y	V	S	D	R	R	W	K	K	A	I	R	L	L	Q	A	S	A	F	F	S	.	.	.	.	G	R	S	A	V	A	P	V	D	L	I	L	L
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		R	L	A	K	I	T	D	G	Y	S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S
Template Known Secondary structure							T	T	T														T	T					T
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions