Job Description P31473 Confidence 96.97% Date Thu Jan 5 11:48:01 GMT 2012 Rank 286 Aligned Residues 116 % Identity 16% Template c2wv9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus Resolution 2.75 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																	.	.																																		.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																	.	.																																		.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		G	E	S	V	F	L	L	G	P	P	G	I	A	K	S	.	.	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P	L	.	.	.	.	.	.	.	.	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	.	.	.	.	.
Query Conservation																	.	.																																		.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence																	.	.																																		.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		R	Q	L	T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	D	A	I	Q	K	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	L	T	P	R	E	H	S	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R
Template Known Secondary structure		T									T	T	T	T	T	T	T	T												T	T								S	S											T	T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
							104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	A	D	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		L	M	S	P	L	R	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	R	V	E	.	.	.	.	.	.	.	.	A	G	E	A	A	A	I	F	M	T	A	T	P	P	G	T	S	D	P
Template Known Secondary structure				S	S	S						S						S	T	T																			.	.	.	.	.	.	.	.	T	T	S								S	S		T	T				S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.									.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions