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Job DescriptionP31473
Confidence99.77%DateThu Jan 5 11:48:01 GMT 2012
Rank34Aligned Residues210
% Identity17%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30...... ...40.........50.........60.........70.........80.........90.
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Query Sequence  KGLYERSHAIRLCLLAA. . . . . . . . LSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQAL
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Template Sequence  KDVAGMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAVATEA. QVPFLAMAGAEFV. . . . . . . . EVIGGL
Template Known Secondary structure  TSS
S








S
TTSS.T

TTTTS........SSSTT
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   309310.........320.........330.........340.........350.........360 .........370... ......
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  KDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEALYDRM
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Template Sequence  GAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTDH. . . . . . . . . . . . . VIVLASTNRADILDGALMRPGRL
Template Known Secondary structure  T
S


T

TT

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GGGGGSGGGSTTS
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   386...390.........400.........410.........420......... 430.........440.........450..
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  LIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDR
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Template Sequence  DRHVFIDLPTLQERREIF. . . . . . . . . . . . . . . . . . . . . . . . . . EQHLKSLKLTQSSTFYSQRLAE. . . . . . LTPGFSGA
Template Known Secondary structure 


S

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BT......T
TT

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   472.......480......... 490.........500.........510. ........
 
   252.......260.........270.........280.........290.
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Query Sequence  RWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSL
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Template Sequence  DIANICNEAA. . . . . . . . LHVHTLNFEYAVERVLAGTAKK
Template Known Secondary structure  ........T


B



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   520......... 530.........540.........550.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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