Job Description P31473 Confidence 99.05% Date Thu Jan 5 11:48:01 GMT 2012 Rank 95 Aligned Residues 150 % Identity 13% Template c2p5tD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:pezt; PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae Resolution 3.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	L	L	A	E	R	I	S	R	L	S	S	S	L	E	K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																										.														.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																										.														.	.	.
Template Sequence		D	S	E	F	K	H	A	L	A	R	N	L	R	S	L	T	R	G	K	K	S	S	K	Q	.	.	.	.	.	.	.	.	.	.	.	P	I	A	I	L	L	G	G	Q	S	G	A	G	K	T	T	I	H	R	I	K	Q	K	E	F	.	Q	G	N	I	V	I	I	D	G	D	S	F	R	.	.	.	S	Q	H
Template Known Secondary structure																		T	T					S	S	.	.	.	.	.	.	.	.	.	.	.								S		T	T	S		T											T	.	T	T							G	G	G	G	G	.	.	.	G	G	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																										.														.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	L	S	I	Q	A	L	K	D	E	G	R	Y	E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	Y	L	E	L	Q	Q	E	Y	G	K	D	S	V	E	Y	T	K	.	.	.	D	F	A	G	K	M	V	E	S	L	V	T	K	L	S	S	L	G	Y	N	L	L	I	E	G	T	L	R	T	V	D	V	P	K	K	T	A	Q	L	L	K	N	K	G	Y	.	.	.	.	.	.	.	.	.	.	.	E	V
Template Known Secondary structure		T	T									T	T	T	T						.	.	.																		T									T	T	S	S												T	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L	D	K	V	Q	D	K	A
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		Q	L	A	L	I	A	T	K	P	.	.	E	L	S	Y	L	S	T	L	I	R	Y	E	E	L	Y	I	I	N	P	N	Q	P	K	E
Template Known Secondary structure											.	.																			T	T				T
Template Predicted Secondary structure											.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions