 |
Job Description | P31473 | Confidence | 96.61% | Date | Thu Jan 5 11:48:01 GMT 2012 |
Rank | 324 | Aligned Residues | 99 |
% Identity | 13% | Template | c2l8bA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:protein trai; |
PDBTitle: trai (381-569)
|
Resolution | UNK |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | L | L | A | A | L | S | G | E | S | V | F | L | L | G | P | P | G | I | . |
A | K | S | L | I | A | R | R | L | K | F | A | F | Q | N | A | R | A | F | E | Y | L | M | T | R | F | S | T | P | E | E | V | F | G | P | L | S | I | Q | A | L | K | D | E | G | R | Y | E | R | L | T | S | G | Y | L | P | E | A | E |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
| . |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|
|   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | S | V | L | A | Q | D | R | P | S | L | A | I | V | S | G | Q | G | G | A | A | G | Q | R | E | R | V | A | E | L | V | M | M | A | R | E | Q | G | R | E | V | Q | I | I | A | A | D | R | R | S | Q | M | N | M | K | Q | D | E | R | L | S | G | E | L | I | T | G | R | R | Q | L | L | E | G | M | A | F | T | P | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |
|
|  |  |
|
| B |
| S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | T | T |  |  |  |  |  |  | S |
| T | T | T |
| S | S |
| S | S | S | T | T | T | T | T | T | T | S |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . |
  |
  |   |
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
I | V | F | L | D | E | I | W | K | A | G | P | A | I | L | N | T | L | L | T |
Query Conservation |   |
. |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
S | T | V | I | V | D | Q | G | E | K | L | S | L | K | E | T | L | T | L | L | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
503 | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|